Gene : Glyma.12G003500 G. max Wm82.a2.v1

Defline:  (1 of 41) 5.3.4.1 - Protein disulfide-isomerase / S-S rearrangase Genomic Order:  35
Name:  ? Glyma.12G003500 Secondary Identifier:  ? PAC:30546715

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G003500 0.5kb upstream 0.5kb upstream 4285 true Chr12: 285588-289872 Glycine max
Glyma.12G003500 0.5kb upstream 0.5kb upstream 500 false Chr12: 289373-289872 Glycine max
Glyma.12G003500 0.5kb downstream 0.5kb downstream 4285 true Chr12: 285088-289372 Glycine max
Glyma.12G003500 0.5kb downstream 0.5kb downstream 500 false Chr12: 285088-285587 Glycine max
Glyma.12G003500 1.0kb upstream 1.0kb upstream 4785 true Chr12: 285588-290372 Glycine max
Glyma.12G003500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 289373-290372 Glycine max
Glyma.12G003500 1.0kb downstream 1.0kb downstream 4785 true Chr12: 284588-289372 Glycine max
Glyma.12G003500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 284588-285587 Glycine max
Glyma.12G003500 2.0kb upstream 2.0kb upstream 5785 true Chr12: 285588-291372 Glycine max
Glyma.12G003500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 289373-291372 Glycine max
Glyma.12G003500 2.0kb downstream 2.0kb downstream 5785 true Chr12: 283588-289372 Glycine max
Glyma.12G003500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 283588-285587 Glycine max
Glyma.12G003500 5.0kb upstream 5.0kb upstream 8785 true Chr12: 285588-294372 Glycine max
Glyma.12G003500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 289373-294372 Glycine max
Glyma.12G003500 5.0kb downstream 5.0kb downstream 8785 true Chr12: 280588-289372 Glycine max
Glyma.12G003500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 280588-285587 Glycine max
Glyma.12G003500 10.0kb upstream 10.0kb upstream 13785 true Chr12: 285588-299372 Glycine max
Glyma.12G003500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 289373-299372 Glycine max
Glyma.12G003500 10.0kb downstream 10.0kb downstream 13785 true Chr12: 275588-289372 Glycine max
Glyma.12G003500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 275588-285587 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307168 5265 Fabidae View MSA
124069527 5270 Rosid View MSA
123737548 5271 Pentapetalae View MSA
122792057 5272 Eudicot View MSA
122048573 5273 Angiosperm View MSA
121345150 5274 Embryophyte View MSA
123426769 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.5824 0.0 90.6755 High High
cufflinks 17.9333 0.0 68.8672    
cufflinks 20.9725 0.0 71.8739 High  
cufflinks 15.3029 0.0 53.7178    
cufflinks 12.3755 0.0 44.9138   Low
cufflinks 19.9169 0.0 68.299    
cufflinks 15.5183 0.0 54.4914    
cufflinks 19.3199 0.0 73.5497    
cufflinks 16.6828 0.0 58.1809    
cufflinks 1.316       Low
cufflinks 1.822        
cufflinks 2.307        
cufflinks 1.271       Low
cufflinks 1.192       Low
cufflinks 1.183       Low
cufflinks 2.283        
cufflinks 1.758        
cufflinks 2.116        
cufflinks 2.064        
cufflinks 3.185       High
cufflinks 1.923        
cufflinks 2.841       High
cufflinks 1.936        
cufflinks 2.052        
cufflinks 2.619       High
cufflinks 1.463        

0 Strain