Gene : Glyma.12G004000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12013 - SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN Genomic Order:  40
Name:  ? Glyma.12G004000 Secondary Identifier:  ? PAC:30548974
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G004000 0.5kb upstream 0.5kb upstream 6742 true Chr12: 316647-323388 Glycine max
Glyma.12G004000 0.5kb upstream 0.5kb upstream 500 false Chr12: 316647-317146 Glycine max
Glyma.12G004000 0.5kb downstream 0.5kb downstream 6742 true Chr12: 317147-323888 Glycine max
Glyma.12G004000 0.5kb downstream 0.5kb downstream 500 false Chr12: 323389-323888 Glycine max
Glyma.12G004000 1.0kb upstream 1.0kb upstream 7242 true Chr12: 316147-323388 Glycine max
Glyma.12G004000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 316147-317146 Glycine max
Glyma.12G004000 1.0kb downstream 1.0kb downstream 7242 true Chr12: 317147-324388 Glycine max
Glyma.12G004000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 323389-324388 Glycine max
Glyma.12G004000 2.0kb upstream 2.0kb upstream 8242 true Chr12: 315147-323388 Glycine max
Glyma.12G004000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 315147-317146 Glycine max
Glyma.12G004000 2.0kb downstream 2.0kb downstream 8242 true Chr12: 317147-325388 Glycine max
Glyma.12G004000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 323389-325388 Glycine max
Glyma.12G004000 5.0kb upstream 5.0kb upstream 11242 true Chr12: 312147-323388 Glycine max
Glyma.12G004000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 312147-317146 Glycine max
Glyma.12G004000 5.0kb downstream 5.0kb downstream 11242 true Chr12: 317147-328388 Glycine max
Glyma.12G004000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 323389-328388 Glycine max
Glyma.12G004000 10.0kb upstream 10.0kb upstream 16242 true Chr12: 307147-323388 Glycine max
Glyma.12G004000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 307147-317146 Glycine max
Glyma.12G004000 10.0kb downstream 10.0kb downstream 16242 true Chr12: 317147-333388 Glycine max
Glyma.12G004000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 323389-333388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303145 5265 Fabidae View MSA
124061518 5270 Rosid View MSA
123751189 5271 Pentapetalae View MSA
122785860 5272 Eudicot View MSA
122043895 5273 Angiosperm View MSA
121349009 5274 Embryophyte View MSA
123423834 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.95844 0.0 35.3917    
cufflinks 7.23286 0.0 27.9554    
cufflinks 3.6191 0.0 22.41   Low
cufflinks 6.40293 0.0 25.6244    
cufflinks 9.63801 0.0 34.7425    
cufflinks 15.4251 0.0 49.2192   High
cufflinks 6.94707 0.0 27.6466    
cufflinks 11.8689 0.0 48.5387    
cufflinks 8.67934 0.0 37.5277    
cufflinks 0.621        
cufflinks 0.409        
cufflinks 0.369        
cufflinks 0.797       High
cufflinks 1.13       High
cufflinks 0.343       Low
cufflinks 0.534        
cufflinks 0.338       Low
cufflinks 0.581        
cufflinks 0.377        
cufflinks 0.515        
cufflinks 0.431        
cufflinks 0.465        
cufflinks 0.478        
cufflinks 0.488        
cufflinks 0.544        
cufflinks 0.429        

0 Strain