Gene : Glyma.12G005200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  52
Name:  ? Glyma.12G005200 Secondary Identifier:  ? PAC:30545725
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G005200 0.5kb upstream 0.5kb upstream 6702 true Chr12: 402705-409406 Glycine max
Glyma.12G005200 0.5kb upstream 0.5kb upstream 500 false Chr12: 408907-409406 Glycine max
Glyma.12G005200 0.5kb downstream 0.5kb downstream 6702 true Chr12: 402205-408906 Glycine max
Glyma.12G005200 0.5kb downstream 0.5kb downstream 500 false Chr12: 402205-402704 Glycine max
Glyma.12G005200 1.0kb upstream 1.0kb upstream 7202 true Chr12: 402705-409906 Glycine max
Glyma.12G005200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 408907-409906 Glycine max
Glyma.12G005200 1.0kb downstream 1.0kb downstream 7202 true Chr12: 401705-408906 Glycine max
Glyma.12G005200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 401705-402704 Glycine max
Glyma.12G005200 2.0kb upstream 2.0kb upstream 8202 true Chr12: 402705-410906 Glycine max
Glyma.12G005200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 408907-410906 Glycine max
Glyma.12G005200 2.0kb downstream 2.0kb downstream 8202 true Chr12: 400705-408906 Glycine max
Glyma.12G005200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 400705-402704 Glycine max
Glyma.12G005200 5.0kb upstream 5.0kb upstream 11202 true Chr12: 402705-413906 Glycine max
Glyma.12G005200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 408907-413906 Glycine max
Glyma.12G005200 5.0kb downstream 5.0kb downstream 11202 true Chr12: 397705-408906 Glycine max
Glyma.12G005200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 397705-402704 Glycine max
Glyma.12G005200 10.0kb upstream 10.0kb upstream 16202 true Chr12: 402705-418906 Glycine max
Glyma.12G005200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 408907-418906 Glycine max
Glyma.12G005200 10.0kb downstream 10.0kb downstream 16202 true Chr12: 392705-408906 Glycine max
Glyma.12G005200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 392705-402704 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304944 5265 Fabidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.8113 0.0 62.5482   High
cufflinks 4.92776 0.0 19.0128    
cufflinks 7.17497 0.0 25.2587    
cufflinks 6.99007 0.0 24.5671    
cufflinks 7.54805 0.0 26.9745    
cufflinks 48.2792 0.0 194.562 High High
cufflinks 1.624 0.0 8.93867   Low
cufflinks 3.66061 0.0 15.0444    
cufflinks 4.08724 0.0 16.1128    
cufflinks 1.92        
cufflinks 2.983       High
cufflinks 0.976        
cufflinks 2.264        
cufflinks 1.302        
cufflinks 1.763        
cufflinks 1.422        
cufflinks 2.727       High
cufflinks 0.654       Low
cufflinks 1.566        
cufflinks 0.613       Low
cufflinks 1.539        
cufflinks 0.871        
cufflinks 1.067        
cufflinks 2.696       High
cufflinks 0.942        
cufflinks 4.937       High

0 Strain