Gene : Glyma.12G005700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12866:SF2 - UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 Genomic Order:  57
Name:  ? Glyma.12G005700 Secondary Identifier:  ? PAC:30547173
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G005700 0.5kb upstream 0.5kb upstream 5259 true Chr12: 432613-437871 Glycine max
Glyma.12G005700 0.5kb upstream 0.5kb upstream 500 false Chr12: 432613-433112 Glycine max
Glyma.12G005700 0.5kb downstream 0.5kb downstream 5259 true Chr12: 433113-438371 Glycine max
Glyma.12G005700 0.5kb downstream 0.5kb downstream 500 false Chr12: 437872-438371 Glycine max
Glyma.12G005700 1.0kb upstream 1.0kb upstream 5759 true Chr12: 432113-437871 Glycine max
Glyma.12G005700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 432113-433112 Glycine max
Glyma.12G005700 1.0kb downstream 1.0kb downstream 5759 true Chr12: 433113-438871 Glycine max
Glyma.12G005700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 437872-438871 Glycine max
Glyma.12G005700 2.0kb upstream 2.0kb upstream 6759 true Chr12: 431113-437871 Glycine max
Glyma.12G005700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 431113-433112 Glycine max
Glyma.12G005700 2.0kb downstream 2.0kb downstream 6759 true Chr12: 433113-439871 Glycine max
Glyma.12G005700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 437872-439871 Glycine max
Glyma.12G005700 5.0kb upstream 5.0kb upstream 9759 true Chr12: 428113-437871 Glycine max
Glyma.12G005700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 428113-433112 Glycine max
Glyma.12G005700 5.0kb downstream 5.0kb downstream 9759 true Chr12: 433113-442871 Glycine max
Glyma.12G005700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 437872-442871 Glycine max
Glyma.12G005700 10.0kb upstream 10.0kb upstream 14759 true Chr12: 423113-437871 Glycine max
Glyma.12G005700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 423113-433112 Glycine max
Glyma.12G005700 10.0kb downstream 10.0kb downstream 14759 true Chr12: 433113-447871 Glycine max
Glyma.12G005700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 437872-447871 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299719 5265 Fabidae View MSA
124064028 5270 Rosid View MSA
123743996 5271 Pentapetalae View MSA
122789041 5272 Eudicot View MSA
122041877 5273 Angiosperm View MSA
121349462 5274 Embryophyte View MSA
123426307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5054 0.0 76.9732    
cufflinks 19.0369 0.0 79.8601    
cufflinks 37.1373 0.0 158.212 High High
cufflinks 16.4744 0.0 64.0353    
cufflinks 21.9383 0.0 83.6225 High  
cufflinks 49.6499 0.0 203.173 High High
cufflinks 12.4178 0.0 50.5858   Low
cufflinks 26.8511 0.0 112.417 High  
cufflinks 29.7278 0.0 125.361 High  
cufflinks 1.518        
cufflinks 2.676       High
cufflinks 1.879        
cufflinks 1.669        
cufflinks 1.236       Low
cufflinks 2.067        
cufflinks 1.945        
cufflinks 1.514        
cufflinks 1.696        
cufflinks 1.421       Low
cufflinks 2.161        
cufflinks 2.311        
cufflinks 1.925        
cufflinks 1.364       Low
cufflinks 2.575       High
cufflinks 1.935        
cufflinks 2.334       High

0 Strain