Gene : Glyma.12G045300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30546//PTHR30546:SF8 - FLAVODOXIN-RELATED PROTEIN WRBA-RELATED Genomic Order:  453
Name:  ? Glyma.12G045300 Secondary Identifier:  ? PAC:30546415
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7279 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G045300 0.5kb upstream 0.5kb upstream 2661 true Chr12: 3288663-3291323 Glycine max
Glyma.12G045300 0.5kb upstream 0.5kb upstream 500 false Chr12: 3288663-3289162 Glycine max
Glyma.12G045300 0.5kb downstream 0.5kb downstream 2661 true Chr12: 3289163-3291823 Glycine max
Glyma.12G045300 0.5kb downstream 0.5kb downstream 500 false Chr12: 3291324-3291823 Glycine max
Glyma.12G045300 1.0kb upstream 1.0kb upstream 3161 true Chr12: 3288163-3291323 Glycine max
Glyma.12G045300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3288163-3289162 Glycine max
Glyma.12G045300 1.0kb downstream 1.0kb downstream 3161 true Chr12: 3289163-3292323 Glycine max
Glyma.12G045300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3291324-3292323 Glycine max
Glyma.12G045300 2.0kb upstream 2.0kb upstream 4161 true Chr12: 3287163-3291323 Glycine max
Glyma.12G045300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3287163-3289162 Glycine max
Glyma.12G045300 2.0kb downstream 2.0kb downstream 4161 true Chr12: 3289163-3293323 Glycine max
Glyma.12G045300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3291324-3293323 Glycine max
Glyma.12G045300 5.0kb upstream 5.0kb upstream 7161 true Chr12: 3284163-3291323 Glycine max
Glyma.12G045300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3284163-3289162 Glycine max
Glyma.12G045300 5.0kb downstream 5.0kb downstream 7161 true Chr12: 3289163-3296323 Glycine max
Glyma.12G045300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3291324-3296323 Glycine max
Glyma.12G045300 10.0kb upstream 10.0kb upstream 12161 true Chr12: 3279163-3291323 Glycine max
Glyma.12G045300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3279163-3289162 Glycine max
Glyma.12G045300 10.0kb downstream 10.0kb downstream 12161 true Chr12: 3289163-3301323 Glycine max
Glyma.12G045300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3291324-3301323 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313825 5265 Fabidae View MSA
124071872 5270 Rosid View MSA
123747296 5271 Pentapetalae View MSA
122787276 5272 Eudicot View MSA
122042695 5273 Angiosperm View MSA
121346048 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.64084 0.0 5.68841    
cufflinks 0.142103 0.0 0.561166 Low Low
cufflinks 1.02663 0.0 3.68931    
cufflinks 2.07718 0.0 7.02256    
cufflinks 9.85556 0.0 27.2867    
cufflinks 188.468 0.0 634.721 High High
cufflinks 0.536678 0.0 2.00084    
cufflinks 2.07651 0.0 7.01185    
cufflinks 13.4101 0.0 36.3353    
cufflinks 5.7        
cufflinks 18.89     High High
cufflinks 0.421        
cufflinks 22.764     High High
cufflinks 3.586        
cufflinks 1.932        
cufflinks 0.065     Low Low
cufflinks 24.908     High High
cufflinks 0.097     Low Low
cufflinks 0.233        
cufflinks 0.032     Low Low
cufflinks 12.256     High  
cufflinks 0.096       Low
cufflinks 0.535        
cufflinks 27.17     High High
cufflinks 0.063     Low Low
cufflinks 16.893     High High

0 Strain