Gene : Glyma.12G048400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR16007//PTHR16007:SF14 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  484
Name:  ? Glyma.12G048400 Secondary Identifier:  ? PAC:30547496
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G048400 0.5kb upstream 0.5kb upstream 2260 true Chr12: 3496945-3499204 Glycine max
Glyma.12G048400 0.5kb upstream 0.5kb upstream 500 false Chr12: 3496945-3497444 Glycine max
Glyma.12G048400 0.5kb downstream 0.5kb downstream 2260 true Chr12: 3497445-3499704 Glycine max
Glyma.12G048400 0.5kb downstream 0.5kb downstream 500 false Chr12: 3499205-3499704 Glycine max
Glyma.12G048400 1.0kb upstream 1.0kb upstream 2760 true Chr12: 3496445-3499204 Glycine max
Glyma.12G048400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3496445-3497444 Glycine max
Glyma.12G048400 1.0kb downstream 1.0kb downstream 2760 true Chr12: 3497445-3500204 Glycine max
Glyma.12G048400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3499205-3500204 Glycine max
Glyma.12G048400 2.0kb upstream 2.0kb upstream 3760 true Chr12: 3495445-3499204 Glycine max
Glyma.12G048400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3495445-3497444 Glycine max
Glyma.12G048400 2.0kb downstream 2.0kb downstream 3760 true Chr12: 3497445-3501204 Glycine max
Glyma.12G048400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3499205-3501204 Glycine max
Glyma.12G048400 5.0kb upstream 5.0kb upstream 6760 true Chr12: 3492445-3499204 Glycine max
Glyma.12G048400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3492445-3497444 Glycine max
Glyma.12G048400 5.0kb downstream 5.0kb downstream 6760 true Chr12: 3497445-3504204 Glycine max
Glyma.12G048400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3499205-3504204 Glycine max
Glyma.12G048400 10.0kb upstream 10.0kb upstream 11760 true Chr12: 3487445-3499204 Glycine max
Glyma.12G048400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3487445-3497444 Glycine max
Glyma.12G048400 10.0kb downstream 10.0kb downstream 11760 true Chr12: 3497445-3509204 Glycine max
Glyma.12G048400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3499205-3509204 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029799 5273 Angiosperm View MSA
122312915 5265 Fabidae View MSA
124062949 5270 Rosid View MSA
123736459 5271 Pentapetalae View MSA
122791594 5272 Eudicot View MSA
121299075 5274 Embryophyte View MSA
123336998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.28117 0.0 4.51888    
cufflinks 0.276904 0.0 1.06087   Low
cufflinks 0.602457 0.0 2.22326    
cufflinks 1.07788 0.0 3.84382    
cufflinks 2.05991 0.0 6.93526    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.56169 0.0 5.41652    
cufflinks 6.75624 0.0 19.3007   High
cufflinks 3.96683 0.0 12.1549    
cufflinks 0.238        
cufflinks 0.098        
cufflinks 0.286        
cufflinks 0.028     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.056       High
cufflinks 0.108        
cufflinks 0.094        
cufflinks 0.058     Low  
cufflinks 0.03     Low Low
cufflinks 0.226        
cufflinks 0.101        
cufflinks 0.239        
cufflinks 0.133        
cufflinks 0.313        
cufflinks 0.332        
cufflinks 0.326        

0 Strain