Gene : Glyma.12G048600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31920:SF18 - B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED Genomic Order:  486
Name:  ? Glyma.12G048600 Secondary Identifier:  ? PAC:30547307
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G048600 0.5kb upstream 0.5kb upstream 4265 true Chr12: 3504850-3509114 Glycine max
Glyma.12G048600 0.5kb upstream 0.5kb upstream 500 false Chr12: 3508615-3509114 Glycine max
Glyma.12G048600 0.5kb downstream 0.5kb downstream 4265 true Chr12: 3504350-3508614 Glycine max
Glyma.12G048600 0.5kb downstream 0.5kb downstream 500 false Chr12: 3504350-3504849 Glycine max
Glyma.12G048600 1.0kb upstream 1.0kb upstream 4765 true Chr12: 3504850-3509614 Glycine max
Glyma.12G048600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3508615-3509614 Glycine max
Glyma.12G048600 1.0kb downstream 1.0kb downstream 4765 true Chr12: 3503850-3508614 Glycine max
Glyma.12G048600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3503850-3504849 Glycine max
Glyma.12G048600 2.0kb upstream 2.0kb upstream 5765 true Chr12: 3504850-3510614 Glycine max
Glyma.12G048600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3508615-3510614 Glycine max
Glyma.12G048600 2.0kb downstream 2.0kb downstream 5765 true Chr12: 3502850-3508614 Glycine max
Glyma.12G048600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3502850-3504849 Glycine max
Glyma.12G048600 5.0kb upstream 5.0kb upstream 8765 true Chr12: 3504850-3513614 Glycine max
Glyma.12G048600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3508615-3513614 Glycine max
Glyma.12G048600 5.0kb downstream 5.0kb downstream 8765 true Chr12: 3499850-3508614 Glycine max
Glyma.12G048600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3499850-3504849 Glycine max
Glyma.12G048600 10.0kb upstream 10.0kb upstream 13765 true Chr12: 3504850-3518614 Glycine max
Glyma.12G048600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3508615-3518614 Glycine max
Glyma.12G048600 10.0kb downstream 10.0kb downstream 13765 true Chr12: 3494850-3508614 Glycine max
Glyma.12G048600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3494850-3504849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309296 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.301812 0.0 1.47385   Low
cufflinks 4.39372 0.0 14.991    
cufflinks 5.48068 0.0 23.3673    
cufflinks 9.57165 0.0 37.8275   High
cufflinks 1.21577 0.0 6.1554    
cufflinks 1.26044 0.0 6.2871    
cufflinks 13.3302 0.0 45.4362   High
cufflinks 1.20709 0.0 7.38874    
cufflinks 2.26201 0.0 9.41344    
cufflinks 0.19        
cufflinks 0.146       Low
cufflinks 1.312       High
cufflinks 0.389        
cufflinks 0.336        
cufflinks 0.264        
cufflinks 0.652        
cufflinks 0.151       Low
cufflinks 1.739       High
cufflinks 1.231       High
cufflinks 0.6        
cufflinks 0.153       Low
cufflinks 0.737        
cufflinks 0.815        
cufflinks 0.255        
cufflinks 0.616        
cufflinks 0.129       Low

0 Strain