Gene : Glyma.12G048700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31920:SF20 - B3 DOMAIN-CONTAINING PROTEIN REM23 Genomic Order:  487
Name:  ? Glyma.12G048700 Secondary Identifier:  ? PAC:30547892
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G048700 0.5kb upstream 0.5kb upstream 2379 true Chr12: 3512183-3514561 Glycine max
Glyma.12G048700 0.5kb upstream 0.5kb upstream 500 false Chr12: 3514062-3514561 Glycine max
Glyma.12G048700 0.5kb downstream 0.5kb downstream 2379 true Chr12: 3511683-3514061 Glycine max
Glyma.12G048700 0.5kb downstream 0.5kb downstream 500 false Chr12: 3511683-3512182 Glycine max
Glyma.12G048700 1.0kb upstream 1.0kb upstream 2879 true Chr12: 3512183-3515061 Glycine max
Glyma.12G048700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3514062-3515061 Glycine max
Glyma.12G048700 1.0kb downstream 1.0kb downstream 2879 true Chr12: 3511183-3514061 Glycine max
Glyma.12G048700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3511183-3512182 Glycine max
Glyma.12G048700 2.0kb upstream 2.0kb upstream 3879 true Chr12: 3512183-3516061 Glycine max
Glyma.12G048700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3514062-3516061 Glycine max
Glyma.12G048700 2.0kb downstream 2.0kb downstream 3879 true Chr12: 3510183-3514061 Glycine max
Glyma.12G048700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3510183-3512182 Glycine max
Glyma.12G048700 5.0kb upstream 5.0kb upstream 6879 true Chr12: 3512183-3519061 Glycine max
Glyma.12G048700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3514062-3519061 Glycine max
Glyma.12G048700 5.0kb downstream 5.0kb downstream 6879 true Chr12: 3507183-3514061 Glycine max
Glyma.12G048700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3507183-3512182 Glycine max
Glyma.12G048700 10.0kb upstream 10.0kb upstream 11879 true Chr12: 3512183-3524061 Glycine max
Glyma.12G048700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3514062-3524061 Glycine max
Glyma.12G048700 10.0kb downstream 10.0kb downstream 11879 true Chr12: 3502183-3514061 Glycine max
Glyma.12G048700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3502183-3512182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253548 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.016512 0.0 0.0748823 Low Low
cufflinks 0.276734 0.0 1.06588    
cufflinks 0.403927 0.0 1.53048   High
cufflinks 0.0149531 0.0 0.0686971 Low Low
cufflinks 0.0325961 0.0 0.139692 Low  
cufflinks 0.307616 0.0 1.18162    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.805       High
cufflinks 0.011     Low  
cufflinks 0.438       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.19        
cufflinks 0.012     Low  
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.076     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.044     Low  
cufflinks 0.015     Low  

0 Strain