Gene : Glyma.12G049000 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11751//PTHR11751:SF435 - SUBGROUP I AMINOTRANSFERASE RELATED Genomic Order:  490
Name:  ? Glyma.12G049000 Secondary Identifier:  ? PAC:30546314
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax POLYAMINSYN3-PWY Glycine max pathologic  
Gmax PWY-43 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G049000 0.5kb upstream 0.5kb upstream 3616 true Chr12: 3522111-3525726 Glycine max
Glyma.12G049000 0.5kb upstream 0.5kb upstream 500 false Chr12: 3525227-3525726 Glycine max
Glyma.12G049000 0.5kb downstream 0.5kb downstream 3616 true Chr12: 3521611-3525226 Glycine max
Glyma.12G049000 0.5kb downstream 0.5kb downstream 500 false Chr12: 3521611-3522110 Glycine max
Glyma.12G049000 1.0kb upstream 1.0kb upstream 4116 true Chr12: 3522111-3526226 Glycine max
Glyma.12G049000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3525227-3526226 Glycine max
Glyma.12G049000 1.0kb downstream 1.0kb downstream 4116 true Chr12: 3521111-3525226 Glycine max
Glyma.12G049000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3521111-3522110 Glycine max
Glyma.12G049000 2.0kb upstream 2.0kb upstream 5116 true Chr12: 3522111-3527226 Glycine max
Glyma.12G049000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3525227-3527226 Glycine max
Glyma.12G049000 2.0kb downstream 2.0kb downstream 5116 true Chr12: 3520111-3525226 Glycine max
Glyma.12G049000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3520111-3522110 Glycine max
Glyma.12G049000 5.0kb upstream 5.0kb upstream 8116 true Chr12: 3522111-3530226 Glycine max
Glyma.12G049000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3525227-3530226 Glycine max
Glyma.12G049000 5.0kb downstream 5.0kb downstream 8116 true Chr12: 3517111-3525226 Glycine max
Glyma.12G049000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3517111-3522110 Glycine max
Glyma.12G049000 10.0kb upstream 10.0kb upstream 13116 true Chr12: 3522111-3535226 Glycine max
Glyma.12G049000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3525227-3535226 Glycine max
Glyma.12G049000 10.0kb downstream 10.0kb downstream 13116 true Chr12: 3512111-3525226 Glycine max
Glyma.12G049000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3512111-3522110 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304718 5265 Fabidae View MSA
124050697 5270 Rosid View MSA
123742620 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.1022 0.0 20.4532    
cufflinks 4.99904 0.0 20.2873    
cufflinks 4.95314 0.0 22.5677    
cufflinks 3.92505 0.0 17.26    
cufflinks 2.44792 0.0 10.5652   Low
cufflinks 4.17427 0.0 17.4351    
cufflinks 11.6334 0.0 40.8321   High
cufflinks 2.61964 0.0 8.13248   Low
cufflinks 2.86458 0.0 11.9963    
cufflinks 0.411        
cufflinks 0.653        
cufflinks 1.279        
cufflinks 0.526        
cufflinks 0.508        
cufflinks 0.373        
cufflinks 1.428        
cufflinks 0.162       Low
cufflinks 1.138        
cufflinks 1.426        
cufflinks 1.843       High
cufflinks 0.344        
cufflinks 1.666       High
cufflinks 1.309        
cufflinks 0.61        
cufflinks 1.729       High
cufflinks 0.243       Low

0 Strain