Gene : Glyma.12G049700 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG1980 - Uncharacterized conserved protein Genomic Order:  497
Name:  ? Glyma.12G049700 Secondary Identifier:  ? PAC:30546547
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G049700 0.5kb upstream 0.5kb upstream 9178 true Chr12: 3563930-3573107 Glycine max
Glyma.12G049700 0.5kb upstream 0.5kb upstream 500 false Chr12: 3563930-3564429 Glycine max
Glyma.12G049700 0.5kb downstream 0.5kb downstream 9178 true Chr12: 3564430-3573607 Glycine max
Glyma.12G049700 0.5kb downstream 0.5kb downstream 500 false Chr12: 3573108-3573607 Glycine max
Glyma.12G049700 1.0kb upstream 1.0kb upstream 9678 true Chr12: 3563430-3573107 Glycine max
Glyma.12G049700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3563430-3564429 Glycine max
Glyma.12G049700 1.0kb downstream 1.0kb downstream 9678 true Chr12: 3564430-3574107 Glycine max
Glyma.12G049700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3573108-3574107 Glycine max
Glyma.12G049700 2.0kb upstream 2.0kb upstream 10678 true Chr12: 3562430-3573107 Glycine max
Glyma.12G049700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3562430-3564429 Glycine max
Glyma.12G049700 2.0kb downstream 2.0kb downstream 10678 true Chr12: 3564430-3575107 Glycine max
Glyma.12G049700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3573108-3575107 Glycine max
Glyma.12G049700 5.0kb upstream 5.0kb upstream 13678 true Chr12: 3559430-3573107 Glycine max
Glyma.12G049700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3559430-3564429 Glycine max
Glyma.12G049700 5.0kb downstream 5.0kb downstream 13678 true Chr12: 3564430-3578107 Glycine max
Glyma.12G049700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3573108-3578107 Glycine max
Glyma.12G049700 10.0kb upstream 10.0kb upstream 18678 true Chr12: 3554430-3573107 Glycine max
Glyma.12G049700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3554430-3564429 Glycine max
Glyma.12G049700 10.0kb downstream 10.0kb downstream 18678 true Chr12: 3564430-3583107 Glycine max
Glyma.12G049700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3573108-3583107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306986 5265 Fabidae View MSA
124068054 5270 Rosid View MSA
123746170 5271 Pentapetalae View MSA
122788558 5272 Eudicot View MSA
122050261 5273 Angiosperm View MSA
121345125 5274 Embryophyte View MSA
123424272 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.20331 0.0 15.2087   High
cufflinks 2.04041 0.0 8.66756    
cufflinks 1.26213 0.0 6.14009   Low
cufflinks 1.74206 0.0 7.86118    
cufflinks 3.48306 0.0 13.1572   High
cufflinks 1.34365 0.0 4.04241   Low
cufflinks 2.28516 0.0 9.51441    
cufflinks 1.82744 0.0 6.45348    
cufflinks 2.48161 0.0 10.9434    
cufflinks 0.301        
cufflinks 0.17        
cufflinks 0.621        
cufflinks 1.013       High
cufflinks 1.357       High
cufflinks 0.291        
cufflinks 0.172        
cufflinks 0.315        
cufflinks 0.466        
cufflinks 0.675       High
cufflinks 0.118       Low
cufflinks 0.369        
cufflinks 0.163        
cufflinks 0.414        
cufflinks 0.155       Low
cufflinks 0.148       Low
cufflinks 0.381        

0 Strain