Gene : Glyma.12G050000 G. max Wm82.a2.v1
Genomic Order:  500 Name:  ? Glyma.12G050000
Secondary Identifier:  ? PAC:30547474
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G050000 0.5kb upstream 0.5kb upstream 5862 true Chr12: 3581704-3587565 Glycine max
Glyma.12G050000 0.5kb upstream 0.5kb upstream 500 false Chr12: 3581704-3582203 Glycine max
Glyma.12G050000 0.5kb downstream 0.5kb downstream 5862 true Chr12: 3582204-3588065 Glycine max
Glyma.12G050000 0.5kb downstream 0.5kb downstream 500 false Chr12: 3587566-3588065 Glycine max
Glyma.12G050000 1.0kb upstream 1.0kb upstream 6362 true Chr12: 3581204-3587565 Glycine max
Glyma.12G050000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3581204-3582203 Glycine max
Glyma.12G050000 1.0kb downstream 1.0kb downstream 6362 true Chr12: 3582204-3588565 Glycine max
Glyma.12G050000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3587566-3588565 Glycine max
Glyma.12G050000 2.0kb upstream 2.0kb upstream 7362 true Chr12: 3580204-3587565 Glycine max
Glyma.12G050000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3580204-3582203 Glycine max
Glyma.12G050000 2.0kb downstream 2.0kb downstream 7362 true Chr12: 3582204-3589565 Glycine max
Glyma.12G050000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3587566-3589565 Glycine max
Glyma.12G050000 5.0kb upstream 5.0kb upstream 10362 true Chr12: 3577204-3587565 Glycine max
Glyma.12G050000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3577204-3582203 Glycine max
Glyma.12G050000 5.0kb downstream 5.0kb downstream 10362 true Chr12: 3582204-3592565 Glycine max
Glyma.12G050000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3587566-3592565 Glycine max
Glyma.12G050000 10.0kb upstream 10.0kb upstream 15362 true Chr12: 3572204-3587565 Glycine max
Glyma.12G050000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3572204-3582203 Glycine max
Glyma.12G050000 10.0kb downstream 10.0kb downstream 15362 true Chr12: 3582204-3597565 Glycine max
Glyma.12G050000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3587566-3597565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299039 5265 Fabidae View MSA
124061999 5270 Rosid View MSA
123741146 5271 Pentapetalae View MSA
122770010 5272 Eudicot View MSA
122046829 5273 Angiosperm View MSA
121348564 5274 Embryophyte View MSA
123380915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28406 0.0 14.4846   High
cufflinks 3.09613 0.0 8.92637    
cufflinks 4.6129 0.0 12.7337    
cufflinks 4.39704 0.0 12.2117    
cufflinks 2.32387 0.0 6.99289   Low
cufflinks 1.79212 0.0 5.57352   Low
cufflinks 3.83379 0.0 10.8549    
cufflinks 3.03339 0.0 8.76808    
cufflinks 2.93941 0.0 8.54136    
cufflinks 1.479       Low
cufflinks 1.708        
cufflinks 3.043       High
cufflinks 1.607        
cufflinks 1.684        
cufflinks 3.198       High
cufflinks 2.592        
cufflinks 1.151       Low
cufflinks 2.715        
cufflinks 2.729        
cufflinks 2.834        
cufflinks 1.803        
cufflinks 2.941        
cufflinks 2.48        
cufflinks 1.882        
cufflinks 2.824        
cufflinks 1.37       Low

0 Strain