Gene : Glyma.12G050600 G. max Wm82.a2.v1
Defline:  (1 of 14) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  506
Name:  ? Glyma.12G050600 Secondary Identifier:  ? PAC:30546865
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G050600 0.5kb upstream 0.5kb upstream 5704 true Chr12: 3633587-3639290 Glycine max
Glyma.12G050600 0.5kb upstream 0.5kb upstream 500 false Chr12: 3633587-3634086 Glycine max
Glyma.12G050600 0.5kb downstream 0.5kb downstream 5704 true Chr12: 3634087-3639790 Glycine max
Glyma.12G050600 0.5kb downstream 0.5kb downstream 500 false Chr12: 3639291-3639790 Glycine max
Glyma.12G050600 1.0kb upstream 1.0kb upstream 6204 true Chr12: 3633087-3639290 Glycine max
Glyma.12G050600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3633087-3634086 Glycine max
Glyma.12G050600 1.0kb downstream 1.0kb downstream 6204 true Chr12: 3634087-3640290 Glycine max
Glyma.12G050600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3639291-3640290 Glycine max
Glyma.12G050600 2.0kb upstream 2.0kb upstream 7204 true Chr12: 3632087-3639290 Glycine max
Glyma.12G050600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3632087-3634086 Glycine max
Glyma.12G050600 2.0kb downstream 2.0kb downstream 7204 true Chr12: 3634087-3641290 Glycine max
Glyma.12G050600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3639291-3641290 Glycine max
Glyma.12G050600 5.0kb upstream 5.0kb upstream 10204 true Chr12: 3629087-3639290 Glycine max
Glyma.12G050600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3629087-3634086 Glycine max
Glyma.12G050600 5.0kb downstream 5.0kb downstream 10204 true Chr12: 3634087-3644290 Glycine max
Glyma.12G050600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3639291-3644290 Glycine max
Glyma.12G050600 10.0kb upstream 10.0kb upstream 15204 true Chr12: 3624087-3639290 Glycine max
Glyma.12G050600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3624087-3634086 Glycine max
Glyma.12G050600 10.0kb downstream 10.0kb downstream 15204 true Chr12: 3634087-3649290 Glycine max
Glyma.12G050600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3639291-3649290 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311736 5265 Fabidae View MSA
124064084 5270 Rosid View MSA
123740426 5271 Pentapetalae View MSA
122786912 5272 Eudicot View MSA
122043285 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54518 0.0 6.29765   Low
cufflinks 2.66853 0.0 9.23161    
cufflinks 1.93378 0.0 7.26881    
cufflinks 4.03436 0.0 13.3538    
cufflinks 4.35485 0.0 14.2689    
cufflinks 5.19544 0.0 16.1761   High
cufflinks 1.88538 0.0 7.23319    
cufflinks 5.90844 0.0 18.6741   High
cufflinks 2.20658 0.0 8.02877    
cufflinks 5.776       High
cufflinks 0.087       Low
cufflinks 1.135        
cufflinks 2.309        
cufflinks 1.776        
cufflinks 0.089       Low
cufflinks 1.148        
cufflinks 0.905        
cufflinks 1.853        
cufflinks 1.21        
cufflinks 0.614        
cufflinks 0.184       Low
cufflinks 0.895        
cufflinks 1.235        
cufflinks 0.061       Low
cufflinks 0.836        
cufflinks 0.368        

0 Strain