Gene : Glyma.12G039100 G. max Wm82.a2.v1
Defline:  (1 of 21) PF05142 - Domain of unknown function (DUF702) (DUF702) Genomic Order:  391
Name:  ? Glyma.12G039100 Secondary Identifier:  ? PAC:30547070
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G039100 0.5kb upstream 0.5kb upstream 1619 true Chr12: 2827913-2829531 Glycine max
Glyma.12G039100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2827913-2828412 Glycine max
Glyma.12G039100 0.5kb downstream 0.5kb downstream 1619 true Chr12: 2828413-2830031 Glycine max
Glyma.12G039100 0.5kb downstream 0.5kb downstream 500 false Chr12: 2829532-2830031 Glycine max
Glyma.12G039100 1.0kb upstream 1.0kb upstream 2119 true Chr12: 2827413-2829531 Glycine max
Glyma.12G039100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2827413-2828412 Glycine max
Glyma.12G039100 1.0kb downstream 1.0kb downstream 2119 true Chr12: 2828413-2830531 Glycine max
Glyma.12G039100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2829532-2830531 Glycine max
Glyma.12G039100 2.0kb upstream 2.0kb upstream 3119 true Chr12: 2826413-2829531 Glycine max
Glyma.12G039100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2826413-2828412 Glycine max
Glyma.12G039100 2.0kb downstream 2.0kb downstream 3119 true Chr12: 2828413-2831531 Glycine max
Glyma.12G039100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2829532-2831531 Glycine max
Glyma.12G039100 5.0kb upstream 5.0kb upstream 6119 true Chr12: 2823413-2829531 Glycine max
Glyma.12G039100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2823413-2828412 Glycine max
Glyma.12G039100 5.0kb downstream 5.0kb downstream 6119 true Chr12: 2828413-2834531 Glycine max
Glyma.12G039100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2829532-2834531 Glycine max
Glyma.12G039100 10.0kb upstream 10.0kb upstream 11119 true Chr12: 2818413-2829531 Glycine max
Glyma.12G039100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2818413-2828412 Glycine max
Glyma.12G039100 10.0kb downstream 10.0kb downstream 11119 true Chr12: 2828413-2839531 Glycine max
Glyma.12G039100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2829532-2839531 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313631 5265 Fabidae View MSA
124064214 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0893049 0.0 0.37384 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0590504 0.0 0.254975 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.07125 0.0 0.303657 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.256        
cufflinks 0.027     Low Low
cufflinks 0.029     Low Low
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.091        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.335       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.202        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.255        

0 Strain