Gene : Glyma.12G039600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33923:SF2 - CALMODULIN-BINDING PROTEIN-LIKE PROTEIN Genomic Order:  396
Name:  ? Glyma.12G039600 Secondary Identifier:  ? PAC:30548151
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G039600 0.5kb upstream 0.5kb upstream 2915 true Chr12: 2864627-2867541 Glycine max
Glyma.12G039600 0.5kb upstream 0.5kb upstream 500 false Chr12: 2867042-2867541 Glycine max
Glyma.12G039600 0.5kb downstream 0.5kb downstream 2915 true Chr12: 2864127-2867041 Glycine max
Glyma.12G039600 0.5kb downstream 0.5kb downstream 500 false Chr12: 2864127-2864626 Glycine max
Glyma.12G039600 1.0kb upstream 1.0kb upstream 3415 true Chr12: 2864627-2868041 Glycine max
Glyma.12G039600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2867042-2868041 Glycine max
Glyma.12G039600 1.0kb downstream 1.0kb downstream 3415 true Chr12: 2863627-2867041 Glycine max
Glyma.12G039600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2863627-2864626 Glycine max
Glyma.12G039600 2.0kb upstream 2.0kb upstream 4415 true Chr12: 2864627-2869041 Glycine max
Glyma.12G039600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2867042-2869041 Glycine max
Glyma.12G039600 2.0kb downstream 2.0kb downstream 4415 true Chr12: 2862627-2867041 Glycine max
Glyma.12G039600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2862627-2864626 Glycine max
Glyma.12G039600 5.0kb upstream 5.0kb upstream 7415 true Chr12: 2864627-2872041 Glycine max
Glyma.12G039600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2867042-2872041 Glycine max
Glyma.12G039600 5.0kb downstream 5.0kb downstream 7415 true Chr12: 2859627-2867041 Glycine max
Glyma.12G039600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2859627-2864626 Glycine max
Glyma.12G039600 10.0kb upstream 10.0kb upstream 12415 true Chr12: 2864627-2877041 Glycine max
Glyma.12G039600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2867042-2877041 Glycine max
Glyma.12G039600 10.0kb downstream 10.0kb downstream 12415 true Chr12: 2854627-2867041 Glycine max
Glyma.12G039600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2854627-2864626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313772 5265 Fabidae View MSA
124070839 5270 Rosid View MSA
123751830 5271 Pentapetalae View MSA
122794379 5272 Eudicot View MSA
122048644 5273 Angiosperm View MSA
121311054 5274 Embryophyte View MSA
123348408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.116715 0.0 0.450127 Low Low
cufflinks 15.6694 0.0 42.1258   High
cufflinks 2.70088 0.0 7.88252    
cufflinks 3.4009 0.0 9.66797    
cufflinks 0.14313 0.0 0.547189 Low Low
cufflinks 1.79323 0.0 5.57084    
cufflinks 0.867388 0.0 2.97058    
cufflinks 1.6703 0.0 5.21665    
cufflinks 0.146245 0.0 0.558518 Low Low
cufflinks 3.46        
cufflinks 0.007     Low Low
cufflinks 3.371        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.024     Low  
cufflinks 10.87     High  
cufflinks 0.027     Low  
cufflinks 3.868        
cufflinks 26.285     High High
cufflinks 4.725        
cufflinks 0.032     Low  
cufflinks 6.697        
cufflinks 7.13        
cufflinks 0.007     Low Low
cufflinks 8.586     High  
cufflinks 0.014     Low Low

0 Strain