Gene : Glyma.12G039900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10351 - TRANSCRIPTION FACTOR BTF3 Genomic Order:  399
Name:  ? Glyma.12G039900 Secondary Identifier:  ? PAC:30549019
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G039900 0.5kb upstream 0.5kb upstream 3416 true Chr12: 2877155-2880570 Glycine max
Glyma.12G039900 0.5kb upstream 0.5kb upstream 500 false Chr12: 2877155-2877654 Glycine max
Glyma.12G039900 0.5kb downstream 0.5kb downstream 3416 true Chr12: 2877655-2881070 Glycine max
Glyma.12G039900 0.5kb downstream 0.5kb downstream 500 false Chr12: 2880571-2881070 Glycine max
Glyma.12G039900 1.0kb upstream 1.0kb upstream 3916 true Chr12: 2876655-2880570 Glycine max
Glyma.12G039900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2876655-2877654 Glycine max
Glyma.12G039900 1.0kb downstream 1.0kb downstream 3916 true Chr12: 2877655-2881570 Glycine max
Glyma.12G039900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2880571-2881570 Glycine max
Glyma.12G039900 2.0kb upstream 2.0kb upstream 4916 true Chr12: 2875655-2880570 Glycine max
Glyma.12G039900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2875655-2877654 Glycine max
Glyma.12G039900 2.0kb downstream 2.0kb downstream 4916 true Chr12: 2877655-2882570 Glycine max
Glyma.12G039900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2880571-2882570 Glycine max
Glyma.12G039900 5.0kb upstream 5.0kb upstream 7916 true Chr12: 2872655-2880570 Glycine max
Glyma.12G039900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2872655-2877654 Glycine max
Glyma.12G039900 5.0kb downstream 5.0kb downstream 7916 true Chr12: 2877655-2885570 Glycine max
Glyma.12G039900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2880571-2885570 Glycine max
Glyma.12G039900 10.0kb upstream 10.0kb upstream 12916 true Chr12: 2867655-2880570 Glycine max
Glyma.12G039900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2867655-2877654 Glycine max
Glyma.12G039900 10.0kb downstream 10.0kb downstream 12916 true Chr12: 2877655-2890570 Glycine max
Glyma.12G039900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2880571-2890570 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312146 5265 Fabidae View MSA
124060990 5270 Rosid View MSA
123752380 5271 Pentapetalae View MSA
122793181 5272 Eudicot View MSA
122044361 5273 Angiosperm View MSA
121348079 5274 Embryophyte View MSA
123423973 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.4774 0.0 208.587 High  
cufflinks 116.76 0.0 427.998 High  
cufflinks 50.8885 0.0 157.069 High Low
cufflinks 61.3312 0.0 194.597 High Low
cufflinks 145.483 0.0 448.798 High High
cufflinks 129.299 0.0 488.707 High High
cufflinks 90.9833 0.0 311.86 High  
cufflinks 81.2248 0.0 271.655 High  
cufflinks 104.851 0.0 374.796 High  
cufflinks 27.187     High  
cufflinks 6.535     High Low
cufflinks 22.299     High  
cufflinks 76.114     High High
cufflinks 98.863     High High
cufflinks 8.245     High Low
cufflinks 31.755     High  
cufflinks 14.906     High  
cufflinks 24.585     High  
cufflinks 36.712     High  
cufflinks 26.8     High  
cufflinks 10.935     High  
cufflinks 27.011     High  
cufflinks 44.636     High  
cufflinks 8.153     High Low
cufflinks 31.932     High  
cufflinks 15.842     High  

0 Strain