Gene : Glyma.12G040600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  406
Name:  ? Glyma.12G040600 Secondary Identifier:  ? PAC:30545950
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G040600 0.5kb upstream 0.5kb upstream 2390 true Chr12: 2932161-2934550 Glycine max
Glyma.12G040600 0.5kb upstream 0.5kb upstream 500 false Chr12: 2934051-2934550 Glycine max
Glyma.12G040600 0.5kb downstream 0.5kb downstream 2390 true Chr12: 2931661-2934050 Glycine max
Glyma.12G040600 0.5kb downstream 0.5kb downstream 500 false Chr12: 2931661-2932160 Glycine max
Glyma.12G040600 1.0kb upstream 1.0kb upstream 2890 true Chr12: 2932161-2935050 Glycine max
Glyma.12G040600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2934051-2935050 Glycine max
Glyma.12G040600 1.0kb downstream 1.0kb downstream 2890 true Chr12: 2931161-2934050 Glycine max
Glyma.12G040600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2931161-2932160 Glycine max
Glyma.12G040600 2.0kb upstream 2.0kb upstream 3890 true Chr12: 2932161-2936050 Glycine max
Glyma.12G040600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2934051-2936050 Glycine max
Glyma.12G040600 2.0kb downstream 2.0kb downstream 3890 true Chr12: 2930161-2934050 Glycine max
Glyma.12G040600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2930161-2932160 Glycine max
Glyma.12G040600 5.0kb upstream 5.0kb upstream 6890 true Chr12: 2932161-2939050 Glycine max
Glyma.12G040600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2934051-2939050 Glycine max
Glyma.12G040600 5.0kb downstream 5.0kb downstream 6890 true Chr12: 2927161-2934050 Glycine max
Glyma.12G040600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2927161-2932160 Glycine max
Glyma.12G040600 10.0kb upstream 10.0kb upstream 11890 true Chr12: 2932161-2944050 Glycine max
Glyma.12G040600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2934051-2944050 Glycine max
Glyma.12G040600 10.0kb downstream 10.0kb downstream 11890 true Chr12: 2922161-2934050 Glycine max
Glyma.12G040600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2922161-2932160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313367 5265 Fabidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1282 0.0 78.1893 High Low
cufflinks 54.2466 0.0 179.331 High  
cufflinks 62.4683 0.0 213.967 High  
cufflinks 126.091 0.0 421.321 High High
cufflinks 91.7661 0.0 345.34 High  
cufflinks 25.9528 0.0 77.4635 High Low
cufflinks 145.439 0.0 504.479 High High
cufflinks 49.4723 0.0 160.35 High  
cufflinks 47.7244 0.0 153.574 High  
cufflinks 7.125        
cufflinks 5.491     High  
cufflinks 25.23     High High
cufflinks 27.677     High High
cufflinks 42.697     High High
cufflinks 11.648     High  
cufflinks 3.374        
cufflinks 2.644        
cufflinks 27.514     High High
cufflinks 15.699     High  
cufflinks 1.517       Low
cufflinks 4.0        
cufflinks 2.197       Low
cufflinks 2.606        
cufflinks 4.769        
cufflinks 2.397        
cufflinks 6.072        

0 Strain