Gene : Glyma.12G041000 G. max Wm82.a2.v1
Defline:  (1 of 4) 1.5.1.3//2.1.1.45 - Dihydrofolate reductase / Tetrahydrofolate dehydrogenase Genomic Order:  410
Name:  ? Glyma.12G041000 Secondary Identifier:  ? PAC:30546585
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3841 Glycine max pathologic  
Gmax PWY-6612 Glycine max pathologic  
Gmax PWY-6614 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7199 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G041000 0.5kb upstream 0.5kb upstream 5589 true Chr12: 2987569-2993157 Glycine max
Glyma.12G041000 0.5kb upstream 0.5kb upstream 500 false Chr12: 2987569-2988068 Glycine max
Glyma.12G041000 0.5kb downstream 0.5kb downstream 5589 true Chr12: 2988069-2993657 Glycine max
Glyma.12G041000 0.5kb downstream 0.5kb downstream 500 false Chr12: 2993158-2993657 Glycine max
Glyma.12G041000 1.0kb upstream 1.0kb upstream 6089 true Chr12: 2987069-2993157 Glycine max
Glyma.12G041000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2987069-2988068 Glycine max
Glyma.12G041000 1.0kb downstream 1.0kb downstream 6089 true Chr12: 2988069-2994157 Glycine max
Glyma.12G041000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2993158-2994157 Glycine max
Glyma.12G041000 2.0kb upstream 2.0kb upstream 7089 true Chr12: 2986069-2993157 Glycine max
Glyma.12G041000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2986069-2988068 Glycine max
Glyma.12G041000 2.0kb downstream 2.0kb downstream 7089 true Chr12: 2988069-2995157 Glycine max
Glyma.12G041000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2993158-2995157 Glycine max
Glyma.12G041000 5.0kb upstream 5.0kb upstream 10089 true Chr12: 2983069-2993157 Glycine max
Glyma.12G041000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2983069-2988068 Glycine max
Glyma.12G041000 5.0kb downstream 5.0kb downstream 10089 true Chr12: 2988069-2998157 Glycine max
Glyma.12G041000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2993158-2998157 Glycine max
Glyma.12G041000 10.0kb upstream 10.0kb upstream 15089 true Chr12: 2978069-2993157 Glycine max
Glyma.12G041000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2978069-2988068 Glycine max
Glyma.12G041000 10.0kb downstream 10.0kb downstream 15089 true Chr12: 2988069-3003157 Glycine max
Glyma.12G041000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2993158-3003157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310398 5265 Fabidae View MSA
124063247 5270 Rosid View MSA
123746183 5271 Pentapetalae View MSA
122795819 5272 Eudicot View MSA
122041907 5273 Angiosperm View MSA
121345404 5274 Embryophyte View MSA
123424391 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.5376 0.0 21.3775    
cufflinks 4.09882 0.0 17.1124    
cufflinks 1.90562 0.0 8.93379    
cufflinks 3.12571 0.0 11.799    
cufflinks 3.5106 0.0 13.4901    
cufflinks 12.4897 0.0 43.8155   High
cufflinks 1.84413 0.0 6.31438    
cufflinks 1.09737 0.0 4.34469   Low
cufflinks 3.77949 0.0 16.2    
cufflinks 0.446        
cufflinks 1.2        
cufflinks 0.705        
cufflinks 1.7       High
cufflinks 1.542       High
cufflinks 0.334       Low
cufflinks 0.552        
cufflinks 0.189       Low
cufflinks 0.599        
cufflinks 1.753       High
cufflinks 0.284       Low
cufflinks 1.059        
cufflinks 0.495        
cufflinks 0.788        
cufflinks 2.182       High
cufflinks 0.428        
cufflinks 0.973        

0 Strain