Gene : Glyma.12G041100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23070//PTHR23070:SF32 - BCS1 AAA-TYPE ATPASE Genomic Order:  411
Name:  ? Glyma.12G041100 Secondary Identifier:  ? PAC:30547639
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G041100 0.5kb upstream 0.5kb upstream 2882 true Chr12: 2996449-2999330 Glycine max
Glyma.12G041100 0.5kb upstream 0.5kb upstream 500 false Chr12: 2998831-2999330 Glycine max
Glyma.12G041100 0.5kb downstream 0.5kb downstream 2882 true Chr12: 2995949-2998830 Glycine max
Glyma.12G041100 0.5kb downstream 0.5kb downstream 500 false Chr12: 2995949-2996448 Glycine max
Glyma.12G041100 1.0kb upstream 1.0kb upstream 3382 true Chr12: 2996449-2999830 Glycine max
Glyma.12G041100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2998831-2999830 Glycine max
Glyma.12G041100 1.0kb downstream 1.0kb downstream 3382 true Chr12: 2995449-2998830 Glycine max
Glyma.12G041100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2995449-2996448 Glycine max
Glyma.12G041100 2.0kb upstream 2.0kb upstream 4382 true Chr12: 2996449-3000830 Glycine max
Glyma.12G041100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2998831-3000830 Glycine max
Glyma.12G041100 2.0kb downstream 2.0kb downstream 4382 true Chr12: 2994449-2998830 Glycine max
Glyma.12G041100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2994449-2996448 Glycine max
Glyma.12G041100 5.0kb upstream 5.0kb upstream 7382 true Chr12: 2996449-3003830 Glycine max
Glyma.12G041100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2998831-3003830 Glycine max
Glyma.12G041100 5.0kb downstream 5.0kb downstream 7382 true Chr12: 2991449-2998830 Glycine max
Glyma.12G041100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2991449-2996448 Glycine max
Glyma.12G041100 10.0kb upstream 10.0kb upstream 12382 true Chr12: 2996449-3008830 Glycine max
Glyma.12G041100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2998831-3008830 Glycine max
Glyma.12G041100 10.0kb downstream 10.0kb downstream 12382 true Chr12: 2986449-2998830 Glycine max
Glyma.12G041100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2986449-2996448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310504 5265 Fabidae View MSA
124072397 5270 Rosid View MSA
123747421 5271 Pentapetalae View MSA
122795594 5272 Eudicot View MSA
122041675 5273 Angiosperm View MSA
121352297 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4917 0.0 30.8372    
cufflinks 7.18356 0.0 19.8562   Low
cufflinks 10.5377 0.0 28.4511    
cufflinks 25.819 0.0 69.6408 High High
cufflinks 8.22866 0.0 22.3982    
cufflinks 9.10158 0.0 24.6738    
cufflinks 11.2208 0.0 30.1225    
cufflinks 13.0119 0.0 34.8043    
cufflinks 7.96534 0.0 21.7923    
cufflinks 7.453       High
cufflinks 2.632        
cufflinks 8.715     High High
cufflinks 4.801        
cufflinks 2.298       Low
cufflinks 2.703        
cufflinks 3.241        
cufflinks 6.868     High High
cufflinks 5.307        
cufflinks 6.621       High
cufflinks 3.094        
cufflinks 2.181       Low
cufflinks 3.854        
cufflinks 4.026        
cufflinks 3.518        
cufflinks 2.822        
cufflinks 4.756        

0 Strain