Gene : Glyma.12G041200 G. max Wm82.a2.v1
Genomic Order:  412 Name:  ? Glyma.12G041200
Secondary Identifier:  ? PAC:30546857
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G041200 0.5kb upstream 0.5kb upstream 1654 true Chr12: 3002687-3004340 Glycine max
Glyma.12G041200 0.5kb upstream 0.5kb upstream 500 false Chr12: 3003841-3004340 Glycine max
Glyma.12G041200 0.5kb downstream 0.5kb downstream 1654 true Chr12: 3002187-3003840 Glycine max
Glyma.12G041200 0.5kb downstream 0.5kb downstream 500 false Chr12: 3002187-3002686 Glycine max
Glyma.12G041200 1.0kb upstream 1.0kb upstream 2154 true Chr12: 3002687-3004840 Glycine max
Glyma.12G041200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3003841-3004840 Glycine max
Glyma.12G041200 1.0kb downstream 1.0kb downstream 2154 true Chr12: 3001687-3003840 Glycine max
Glyma.12G041200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3001687-3002686 Glycine max
Glyma.12G041200 2.0kb upstream 2.0kb upstream 3154 true Chr12: 3002687-3005840 Glycine max
Glyma.12G041200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3003841-3005840 Glycine max
Glyma.12G041200 2.0kb downstream 2.0kb downstream 3154 true Chr12: 3000687-3003840 Glycine max
Glyma.12G041200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3000687-3002686 Glycine max
Glyma.12G041200 5.0kb upstream 5.0kb upstream 6154 true Chr12: 3002687-3008840 Glycine max
Glyma.12G041200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3003841-3008840 Glycine max
Glyma.12G041200 5.0kb downstream 5.0kb downstream 6154 true Chr12: 2997687-3003840 Glycine max
Glyma.12G041200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2997687-3002686 Glycine max
Glyma.12G041200 10.0kb upstream 10.0kb upstream 11154 true Chr12: 3002687-3013840 Glycine max
Glyma.12G041200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3003841-3013840 Glycine max
Glyma.12G041200 10.0kb downstream 10.0kb downstream 11154 true Chr12: 2992687-3003840 Glycine max
Glyma.12G041200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2992687-3002686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313702 5265 Fabidae View MSA
124074138 5270 Rosid View MSA
123749937 5271 Pentapetalae View MSA
122792999 5272 Eudicot View MSA
122042966 5273 Angiosperm View MSA
121310057 5274 Embryophyte View MSA
123347654 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.650029 0.0 2.42735   High
cufflinks 0.113836 0.0 0.45624 Low  
cufflinks 0.134331 0.0 0.534786 Low  
cufflinks 0.0415732 0.0 0.176012 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.190938 0.0 0.750607 Low  
cufflinks 0.116737 0.0 0.467356 Low  
cufflinks 0.558       High
cufflinks 0.017     Low Low
cufflinks 0.256       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.155        
cufflinks 0.201        
cufflinks 0.088     Low  
cufflinks 0.03     Low  
cufflinks 0.234        
cufflinks 0.043     Low  
cufflinks 0.103     Low  
cufflinks 0.102        
cufflinks 0.115        
cufflinks 0.021     Low Low

0 Strain