Gene : Glyma.12G042100 G. max Wm82.a2.v1
Defline:  (1 of 65) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  421
Name:  ? Glyma.12G042100 Secondary Identifier:  ? PAC:30546497
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G042100 0.5kb upstream 0.5kb upstream 1770 true Chr12: 3038660-3040429 Glycine max
Glyma.12G042100 0.5kb upstream 0.5kb upstream 500 false Chr12: 3038660-3039159 Glycine max
Glyma.12G042100 0.5kb downstream 0.5kb downstream 1770 true Chr12: 3039160-3040929 Glycine max
Glyma.12G042100 0.5kb downstream 0.5kb downstream 500 false Chr12: 3040430-3040929 Glycine max
Glyma.12G042100 1.0kb upstream 1.0kb upstream 2270 true Chr12: 3038160-3040429 Glycine max
Glyma.12G042100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3038160-3039159 Glycine max
Glyma.12G042100 1.0kb downstream 1.0kb downstream 2270 true Chr12: 3039160-3041429 Glycine max
Glyma.12G042100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3040430-3041429 Glycine max
Glyma.12G042100 2.0kb upstream 2.0kb upstream 3270 true Chr12: 3037160-3040429 Glycine max
Glyma.12G042100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3037160-3039159 Glycine max
Glyma.12G042100 2.0kb downstream 2.0kb downstream 3270 true Chr12: 3039160-3042429 Glycine max
Glyma.12G042100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3040430-3042429 Glycine max
Glyma.12G042100 5.0kb upstream 5.0kb upstream 6270 true Chr12: 3034160-3040429 Glycine max
Glyma.12G042100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3034160-3039159 Glycine max
Glyma.12G042100 5.0kb downstream 5.0kb downstream 6270 true Chr12: 3039160-3045429 Glycine max
Glyma.12G042100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3040430-3045429 Glycine max
Glyma.12G042100 10.0kb upstream 10.0kb upstream 11270 true Chr12: 3029160-3040429 Glycine max
Glyma.12G042100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3029160-3039159 Glycine max
Glyma.12G042100 10.0kb downstream 10.0kb downstream 11270 true Chr12: 3039160-3050429 Glycine max
Glyma.12G042100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3040430-3050429 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311917 5265 Fabidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.484284 0.0 1.81895    
cufflinks 0.0512951 0.0 0.211619 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.2273 0.0 10.3961   High
cufflinks 1.8898 0.0 6.49976    
cufflinks 0.074837 0.0 0.30357 Low  
cufflinks 0.0482635 0.0 0.199871 Low Low
cufflinks 1.14858 0.0 4.11194    
cufflinks 0.055     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.623       High
cufflinks 8.566     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.101     Low  
cufflinks 0.131        
cufflinks 0.018     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.182        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.048     Low  
cufflinks 0.067     Low  
cufflinks 0.338        

0 Strain