Gene : Glyma.12G042200 G. max Wm82.a2.v1
Defline:  (1 of 65) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  422
Name:  ? Glyma.12G042200 Secondary Identifier:  ? PAC:30546835
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G042200 0.5kb upstream 0.5kb upstream 1513 true Chr12: 3046335-3047847 Glycine max
Glyma.12G042200 0.5kb upstream 0.5kb upstream 500 false Chr12: 3046335-3046834 Glycine max
Glyma.12G042200 0.5kb downstream 0.5kb downstream 1513 true Chr12: 3046835-3048347 Glycine max
Glyma.12G042200 0.5kb downstream 0.5kb downstream 500 false Chr12: 3047848-3048347 Glycine max
Glyma.12G042200 1.0kb upstream 1.0kb upstream 2013 true Chr12: 3045835-3047847 Glycine max
Glyma.12G042200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3045835-3046834 Glycine max
Glyma.12G042200 1.0kb downstream 1.0kb downstream 2013 true Chr12: 3046835-3048847 Glycine max
Glyma.12G042200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3047848-3048847 Glycine max
Glyma.12G042200 2.0kb upstream 2.0kb upstream 3013 true Chr12: 3044835-3047847 Glycine max
Glyma.12G042200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3044835-3046834 Glycine max
Glyma.12G042200 2.0kb downstream 2.0kb downstream 3013 true Chr12: 3046835-3049847 Glycine max
Glyma.12G042200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3047848-3049847 Glycine max
Glyma.12G042200 5.0kb upstream 5.0kb upstream 6013 true Chr12: 3041835-3047847 Glycine max
Glyma.12G042200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3041835-3046834 Glycine max
Glyma.12G042200 5.0kb downstream 5.0kb downstream 6013 true Chr12: 3046835-3052847 Glycine max
Glyma.12G042200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3047848-3052847 Glycine max
Glyma.12G042200 10.0kb upstream 10.0kb upstream 11013 true Chr12: 3036835-3047847 Glycine max
Glyma.12G042200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3036835-3046834 Glycine max
Glyma.12G042200 10.0kb downstream 10.0kb downstream 11013 true Chr12: 3046835-3057847 Glycine max
Glyma.12G042200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3047848-3057847 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311917 5265 Fabidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.127134 0.0 0.507373 Low  
cufflinks 0.0107481 0.0 0.0514919 Low Low
cufflinks 0.115475 0.0 0.462416 Low  
cufflinks 2.79359 0.0 9.37124   High
cufflinks 1.89607 0.0 6.61822    
cufflinks 0.00794237 0.0 0.0395329 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.12631 0.0 4.08    
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low  
cufflinks 4.421       High
cufflinks 3.436       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.079     Low  
cufflinks 0.124        
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.25        

0 Strain