Gene : Glyma.12G042300 G. max Wm82.a2.v1
Defline:  (1 of 65) PF03087 - Arabidopsis protein of unknown function (DUF241) Genomic Order:  423
Name:  ? Glyma.12G042300 Secondary Identifier:  ? PAC:30546786
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G042300 0.5kb upstream 0.5kb upstream 1364 true Chr12: 3050386-3051749 Glycine max
Glyma.12G042300 0.5kb upstream 0.5kb upstream 500 false Chr12: 3051250-3051749 Glycine max
Glyma.12G042300 0.5kb downstream 0.5kb downstream 1364 true Chr12: 3049886-3051249 Glycine max
Glyma.12G042300 0.5kb downstream 0.5kb downstream 500 false Chr12: 3049886-3050385 Glycine max
Glyma.12G042300 1.0kb upstream 1.0kb upstream 1864 true Chr12: 3050386-3052249 Glycine max
Glyma.12G042300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3051250-3052249 Glycine max
Glyma.12G042300 1.0kb downstream 1.0kb downstream 1864 true Chr12: 3049386-3051249 Glycine max
Glyma.12G042300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3049386-3050385 Glycine max
Glyma.12G042300 2.0kb upstream 2.0kb upstream 2864 true Chr12: 3050386-3053249 Glycine max
Glyma.12G042300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3051250-3053249 Glycine max
Glyma.12G042300 2.0kb downstream 2.0kb downstream 2864 true Chr12: 3048386-3051249 Glycine max
Glyma.12G042300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3048386-3050385 Glycine max
Glyma.12G042300 5.0kb upstream 5.0kb upstream 5864 true Chr12: 3050386-3056249 Glycine max
Glyma.12G042300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3051250-3056249 Glycine max
Glyma.12G042300 5.0kb downstream 5.0kb downstream 5864 true Chr12: 3045386-3051249 Glycine max
Glyma.12G042300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3045386-3050385 Glycine max
Glyma.12G042300 10.0kb upstream 10.0kb upstream 10864 true Chr12: 3050386-3061249 Glycine max
Glyma.12G042300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3051250-3061249 Glycine max
Glyma.12G042300 10.0kb downstream 10.0kb downstream 10864 true Chr12: 3040386-3051249 Glycine max
Glyma.12G042300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3040386-3050385 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311917 5265 Fabidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0517521 0.0 0.218771 Low  
cufflinks 0.0160688 0.0 0.0752012 Low  
cufflinks 6.80829E-4 0.0 0.00836572 Low Low
cufflinks 2.20608 0.0 7.71645   High
cufflinks 2.01792 0.0 7.10958   High
cufflinks 0.0112446 0.0 0.0548532 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.702994 0.0 2.63628    
cufflinks 0.049     Low  
cufflinks 0.023     Low Low
cufflinks 0.039     Low  
cufflinks 4.652       High
cufflinks 4.048       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.183        

0 Strain