Gene : Glyma.12G044000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10261 - COATOMER SUBUNIT GAMMA Genomic Order:  440
Name:  ? Glyma.12G044000 Secondary Identifier:  ? PAC:30546045
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G044000 0.5kb upstream 0.5kb upstream 8535 true Chr12: 3189194-3197728 Glycine max
Glyma.12G044000 0.5kb upstream 0.5kb upstream 500 false Chr12: 3197229-3197728 Glycine max
Glyma.12G044000 0.5kb downstream 0.5kb downstream 8535 true Chr12: 3188694-3197228 Glycine max
Glyma.12G044000 0.5kb downstream 0.5kb downstream 500 false Chr12: 3188694-3189193 Glycine max
Glyma.12G044000 1.0kb upstream 1.0kb upstream 9035 true Chr12: 3189194-3198228 Glycine max
Glyma.12G044000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3197229-3198228 Glycine max
Glyma.12G044000 1.0kb downstream 1.0kb downstream 9035 true Chr12: 3188194-3197228 Glycine max
Glyma.12G044000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3188194-3189193 Glycine max
Glyma.12G044000 2.0kb upstream 2.0kb upstream 10035 true Chr12: 3189194-3199228 Glycine max
Glyma.12G044000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3197229-3199228 Glycine max
Glyma.12G044000 2.0kb downstream 2.0kb downstream 10035 true Chr12: 3187194-3197228 Glycine max
Glyma.12G044000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3187194-3189193 Glycine max
Glyma.12G044000 5.0kb upstream 5.0kb upstream 13035 true Chr12: 3189194-3202228 Glycine max
Glyma.12G044000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3197229-3202228 Glycine max
Glyma.12G044000 5.0kb downstream 5.0kb downstream 13035 true Chr12: 3184194-3197228 Glycine max
Glyma.12G044000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3184194-3189193 Glycine max
Glyma.12G044000 10.0kb upstream 10.0kb upstream 18035 true Chr12: 3189194-3207228 Glycine max
Glyma.12G044000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3197229-3207228 Glycine max
Glyma.12G044000 10.0kb downstream 10.0kb downstream 18035 true Chr12: 3179194-3197228 Glycine max
Glyma.12G044000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3179194-3189193 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.5578 0.0 91.2874 High  
cufflinks 29.9664 0.0 86.0534 High Low
cufflinks 25.3025 0.0 71.4381 High Low
cufflinks 45.8639 0.0 140.368 High  
cufflinks 51.708 0.0 161.339 High High
cufflinks 40.9173 0.0 123.172 High  
cufflinks 41.6306 0.0 124.985 High  
cufflinks 46.7929 0.0 143.659 High  
cufflinks 37.5906 0.0 111.454 High  
cufflinks 27.134     High High
cufflinks 6.213     High Low
cufflinks 12.404     High  
cufflinks 28.124     High High
cufflinks 34.51     High High
cufflinks 9.923     High  
cufflinks 14.447     High  
cufflinks 12.547     High  
cufflinks 19.684     High  
cufflinks 19.461     High  
cufflinks 11.71     High  
cufflinks 10.837     High  
cufflinks 13.122     High  
cufflinks 14.714     High  
cufflinks 9.701     High  
cufflinks 12.59     High  
cufflinks 11.031     High  

0 Strain