Gene : Glyma.12G044200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12802:SF39 - SWI/SNF COMPLEX SUBUNIT SWI3D Genomic Order:  442
Name:  ? Glyma.12G044200 Secondary Identifier:  ? PAC:30545422
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G044200 0.5kb upstream 0.5kb upstream 7611 true Chr12: 3205315-3212925 Glycine max
Glyma.12G044200 0.5kb upstream 0.5kb upstream 500 false Chr12: 3212426-3212925 Glycine max
Glyma.12G044200 0.5kb downstream 0.5kb downstream 7611 true Chr12: 3204815-3212425 Glycine max
Glyma.12G044200 0.5kb downstream 0.5kb downstream 500 false Chr12: 3204815-3205314 Glycine max
Glyma.12G044200 1.0kb upstream 1.0kb upstream 8111 true Chr12: 3205315-3213425 Glycine max
Glyma.12G044200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3212426-3213425 Glycine max
Glyma.12G044200 1.0kb downstream 1.0kb downstream 8111 true Chr12: 3204315-3212425 Glycine max
Glyma.12G044200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3204315-3205314 Glycine max
Glyma.12G044200 2.0kb upstream 2.0kb upstream 9111 true Chr12: 3205315-3214425 Glycine max
Glyma.12G044200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3212426-3214425 Glycine max
Glyma.12G044200 2.0kb downstream 2.0kb downstream 9111 true Chr12: 3203315-3212425 Glycine max
Glyma.12G044200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3203315-3205314 Glycine max
Glyma.12G044200 5.0kb upstream 5.0kb upstream 12111 true Chr12: 3205315-3217425 Glycine max
Glyma.12G044200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3212426-3217425 Glycine max
Glyma.12G044200 5.0kb downstream 5.0kb downstream 12111 true Chr12: 3200315-3212425 Glycine max
Glyma.12G044200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3200315-3205314 Glycine max
Glyma.12G044200 10.0kb upstream 10.0kb upstream 17111 true Chr12: 3205315-3222425 Glycine max
Glyma.12G044200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3212426-3222425 Glycine max
Glyma.12G044200 10.0kb downstream 10.0kb downstream 17111 true Chr12: 3195315-3212425 Glycine max
Glyma.12G044200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3195315-3205314 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304014 5265 Fabidae View MSA
124063098 5270 Rosid View MSA
123749102 5271 Pentapetalae View MSA
122792303 5272 Eudicot View MSA
122043104 5273 Angiosperm View MSA
121349137 5274 Embryophyte View MSA
123428437 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.33225 0.0 16.0003    
cufflinks 4.3699 0.0 16.1323    
cufflinks 5.14234 0.0 15.5556    
cufflinks 4.41643 0.0 16.1979    
cufflinks 4.55338 0.0 13.8984    
cufflinks 2.40747 0.0 8.65524   Low
cufflinks 5.00975 0.0 15.2172    
cufflinks 3.40717 0.0 10.8348    
cufflinks 3.99629 0.0 12.4326    
cufflinks 1.414        
cufflinks 0.987       Low
cufflinks 1.684        
cufflinks 1.555        
cufflinks 1.616        
cufflinks 2.044        
cufflinks 2.333        
cufflinks 0.791       Low
cufflinks 2.017        
cufflinks 2.224        
cufflinks 2.468       High
cufflinks 1.406        
cufflinks 2.537       High
cufflinks 2.449       High
cufflinks 0.998       Low
cufflinks 2.368        
cufflinks 0.919       Low

0 Strain