Gene : Glyma.12G044600 G. max Wm82.a2.v1
Defline:  (1 of 26) PF03181 - BURP domain (BURP) Genomic Order:  446
Name:  ? Glyma.12G044600 Secondary Identifier:  ? PAC:30548213
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G044600 0.5kb upstream 0.5kb upstream 3601 true Chr12: 3238165-3241765 Glycine max
Glyma.12G044600 0.5kb upstream 0.5kb upstream 500 false Chr12: 3238165-3238664 Glycine max
Glyma.12G044600 0.5kb downstream 0.5kb downstream 3601 true Chr12: 3238665-3242265 Glycine max
Glyma.12G044600 0.5kb downstream 0.5kb downstream 500 false Chr12: 3241766-3242265 Glycine max
Glyma.12G044600 1.0kb upstream 1.0kb upstream 4101 true Chr12: 3237665-3241765 Glycine max
Glyma.12G044600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 3237665-3238664 Glycine max
Glyma.12G044600 1.0kb downstream 1.0kb downstream 4101 true Chr12: 3238665-3242765 Glycine max
Glyma.12G044600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 3241766-3242765 Glycine max
Glyma.12G044600 2.0kb upstream 2.0kb upstream 5101 true Chr12: 3236665-3241765 Glycine max
Glyma.12G044600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 3236665-3238664 Glycine max
Glyma.12G044600 2.0kb downstream 2.0kb downstream 5101 true Chr12: 3238665-3243765 Glycine max
Glyma.12G044600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 3241766-3243765 Glycine max
Glyma.12G044600 5.0kb upstream 5.0kb upstream 8101 true Chr12: 3233665-3241765 Glycine max
Glyma.12G044600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 3233665-3238664 Glycine max
Glyma.12G044600 5.0kb downstream 5.0kb downstream 8101 true Chr12: 3238665-3246765 Glycine max
Glyma.12G044600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 3241766-3246765 Glycine max
Glyma.12G044600 10.0kb upstream 10.0kb upstream 13101 true Chr12: 3228665-3241765 Glycine max
Glyma.12G044600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 3228665-3238664 Glycine max
Glyma.12G044600 10.0kb downstream 10.0kb downstream 13101 true Chr12: 3238665-3251765 Glycine max
Glyma.12G044600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 3241766-3251765 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313486 5265 Fabidae View MSA
124075516 5270 Rosid View MSA
123628890 5271 Pentapetalae View MSA
122663128 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3511 0.0 7.55769    
cufflinks 0.780458 0.0 2.81091    
cufflinks 0.144928 0.0 0.565639 Low Low
cufflinks 0.30294 0.0 1.1456    
cufflinks 76.978 0.0 230.4 High High
cufflinks 152.467 0.0 519.29 High High
cufflinks 0.613416 0.0 2.23949    
cufflinks 0.238114 0.0 0.909649    
cufflinks 59.1455 0.0 170.447 High High
cufflinks 0.16        
cufflinks 14.182     High  
cufflinks 0.112     Low  
cufflinks 81.324     High High
cufflinks 54.546     High High
cufflinks 0.777        
cufflinks 0.115        
cufflinks 8.413     High  
cufflinks 0.151        
cufflinks 0.298        
cufflinks 0.081     Low Low
cufflinks 10.51     High  
cufflinks 0.107        
cufflinks 0.14        
cufflinks 17.248     High High
cufflinks 0.084     Low Low
cufflinks 36.261     High High

0 Strain