Gene : Glyma.12G030200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32091:SF5 - GLYCINE-RICH PROTEIN Genomic Order:  302
Name:  ? Glyma.12G030200 Secondary Identifier:  ? PAC:30548552
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G030200 0.5kb upstream 0.5kb upstream 2977 true Chr12: 2254652-2257628 Glycine max
Glyma.12G030200 0.5kb upstream 0.5kb upstream 500 false Chr12: 2254652-2255151 Glycine max
Glyma.12G030200 0.5kb downstream 0.5kb downstream 2977 true Chr12: 2255152-2258128 Glycine max
Glyma.12G030200 0.5kb downstream 0.5kb downstream 500 false Chr12: 2257629-2258128 Glycine max
Glyma.12G030200 1.0kb upstream 1.0kb upstream 3477 true Chr12: 2254152-2257628 Glycine max
Glyma.12G030200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2254152-2255151 Glycine max
Glyma.12G030200 1.0kb downstream 1.0kb downstream 3477 true Chr12: 2255152-2258628 Glycine max
Glyma.12G030200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2257629-2258628 Glycine max
Glyma.12G030200 2.0kb upstream 2.0kb upstream 4477 true Chr12: 2253152-2257628 Glycine max
Glyma.12G030200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2253152-2255151 Glycine max
Glyma.12G030200 2.0kb downstream 2.0kb downstream 4477 true Chr12: 2255152-2259628 Glycine max
Glyma.12G030200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2257629-2259628 Glycine max
Glyma.12G030200 5.0kb upstream 5.0kb upstream 7477 true Chr12: 2250152-2257628 Glycine max
Glyma.12G030200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2250152-2255151 Glycine max
Glyma.12G030200 5.0kb downstream 5.0kb downstream 7477 true Chr12: 2255152-2262628 Glycine max
Glyma.12G030200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2257629-2262628 Glycine max
Glyma.12G030200 10.0kb upstream 10.0kb upstream 12477 true Chr12: 2245152-2257628 Glycine max
Glyma.12G030200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2245152-2255151 Glycine max
Glyma.12G030200 10.0kb downstream 10.0kb downstream 12477 true Chr12: 2255152-2267628 Glycine max
Glyma.12G030200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2257629-2267628 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305390 5265 Fabidae View MSA
124068960 5270 Rosid View MSA
123736646 5271 Pentapetalae View MSA
122769870 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.0794 0.0 70.2346 High  
cufflinks 13.1951 0.0 35.3865   Low
cufflinks 17.8397 0.0 47.6038    
cufflinks 22.5705 0.0 60.4018 High  
cufflinks 23.2688 0.0 62.5069 High  
cufflinks 15.2908 0.0 40.8154   Low
cufflinks 33.8978 0.0 92.9167 High High
cufflinks 17.3579 0.0 46.3105    
cufflinks 24.0126 0.0 64.4001 High  
cufflinks 14.383     High  
cufflinks 30.053     High High
cufflinks 17.68     High  
cufflinks 13.427     High  
cufflinks 16.135     High  
cufflinks 27.636     High High
cufflinks 13.65     High  
cufflinks 31.434     High High
cufflinks 14.439     High  
cufflinks 11.786     High Low
cufflinks 13.711     High  
cufflinks 30.644     High High
cufflinks 13.974     High  
cufflinks 16.102     High  
cufflinks 24.356     High  
cufflinks 15.004     High  
cufflinks 26.581     High High

0 Strain