Gene : Glyma.12G030400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10903:SF47 - TRANSLOCASE OF CHLOROPLAST 120, CHLOROPLASTIC-RELATED Genomic Order:  304
Name:  ? Glyma.12G030400 Secondary Identifier:  ? PAC:30547764
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G030400 0.5kb upstream 0.5kb upstream 4974 true Chr12: 2266397-2271370 Glycine max
Glyma.12G030400 0.5kb upstream 0.5kb upstream 500 false Chr12: 2270871-2271370 Glycine max
Glyma.12G030400 0.5kb downstream 0.5kb downstream 4974 true Chr12: 2265897-2270870 Glycine max
Glyma.12G030400 0.5kb downstream 0.5kb downstream 500 false Chr12: 2265897-2266396 Glycine max
Glyma.12G030400 1.0kb upstream 1.0kb upstream 5474 true Chr12: 2266397-2271870 Glycine max
Glyma.12G030400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2270871-2271870 Glycine max
Glyma.12G030400 1.0kb downstream 1.0kb downstream 5474 true Chr12: 2265397-2270870 Glycine max
Glyma.12G030400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2265397-2266396 Glycine max
Glyma.12G030400 2.0kb upstream 2.0kb upstream 6474 true Chr12: 2266397-2272870 Glycine max
Glyma.12G030400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2270871-2272870 Glycine max
Glyma.12G030400 2.0kb downstream 2.0kb downstream 6474 true Chr12: 2264397-2270870 Glycine max
Glyma.12G030400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2264397-2266396 Glycine max
Glyma.12G030400 5.0kb upstream 5.0kb upstream 9474 true Chr12: 2266397-2275870 Glycine max
Glyma.12G030400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2270871-2275870 Glycine max
Glyma.12G030400 5.0kb downstream 5.0kb downstream 9474 true Chr12: 2261397-2270870 Glycine max
Glyma.12G030400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2261397-2266396 Glycine max
Glyma.12G030400 10.0kb upstream 10.0kb upstream 14474 true Chr12: 2266397-2280870 Glycine max
Glyma.12G030400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2270871-2280870 Glycine max
Glyma.12G030400 10.0kb downstream 10.0kb downstream 14474 true Chr12: 2256397-2270870 Glycine max
Glyma.12G030400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2256397-2266396 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314533 5265 Fabidae View MSA
124067138 5270 Rosid View MSA
123750578 5271 Pentapetalae View MSA
122788806 5272 Eudicot View MSA
122047834 5273 Angiosperm View MSA
121348956 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5125 0.0 31.216    
cufflinks 13.1205 0.0 35.8809    
cufflinks 16.4345 0.0 46.0293   High
cufflinks 12.4854 0.0 34.0429    
cufflinks 9.09863 0.0 24.3934   Low
cufflinks 8.6407 0.0 23.1399   Low
cufflinks 18.0534 0.0 50.7804   High
cufflinks 9.36807 0.0 25.1574    
cufflinks 10.9668 0.0 29.6536    
cufflinks 11.242     High Low
cufflinks 29.581     High  
cufflinks 21.559     High  
cufflinks 9.948     High Low
cufflinks 11.855     High Low
cufflinks 30.655     High High
cufflinks 23.82     High  
cufflinks 6.137     High Low
cufflinks 16.998     High  
cufflinks 20.166     High  
cufflinks 30.716     High High
cufflinks 27.041     High  
cufflinks 24.119     High  
cufflinks 17.332     High  
cufflinks 23.633     High  
cufflinks 29.806     High  
cufflinks 15.215     High  

0 Strain