Gene : Glyma.12G033000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  330
Name:  ? Glyma.12G033000 Secondary Identifier:  ? PAC:30545341
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G033000 0.5kb upstream 0.5kb upstream 4192 true Chr12: 2494138-2498329 Glycine max
Glyma.12G033000 0.5kb upstream 0.5kb upstream 500 false Chr12: 2494138-2494637 Glycine max
Glyma.12G033000 0.5kb downstream 0.5kb downstream 4192 true Chr12: 2494638-2498829 Glycine max
Glyma.12G033000 0.5kb downstream 0.5kb downstream 500 false Chr12: 2498330-2498829 Glycine max
Glyma.12G033000 1.0kb upstream 1.0kb upstream 4692 true Chr12: 2493638-2498329 Glycine max
Glyma.12G033000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2493638-2494637 Glycine max
Glyma.12G033000 1.0kb downstream 1.0kb downstream 4692 true Chr12: 2494638-2499329 Glycine max
Glyma.12G033000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2498330-2499329 Glycine max
Glyma.12G033000 2.0kb upstream 2.0kb upstream 5692 true Chr12: 2492638-2498329 Glycine max
Glyma.12G033000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2492638-2494637 Glycine max
Glyma.12G033000 2.0kb downstream 2.0kb downstream 5692 true Chr12: 2494638-2500329 Glycine max
Glyma.12G033000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2498330-2500329 Glycine max
Glyma.12G033000 5.0kb upstream 5.0kb upstream 8692 true Chr12: 2489638-2498329 Glycine max
Glyma.12G033000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2489638-2494637 Glycine max
Glyma.12G033000 5.0kb downstream 5.0kb downstream 8692 true Chr12: 2494638-2503329 Glycine max
Glyma.12G033000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2498330-2503329 Glycine max
Glyma.12G033000 10.0kb upstream 10.0kb upstream 13692 true Chr12: 2484638-2498329 Glycine max
Glyma.12G033000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2484638-2494637 Glycine max
Glyma.12G033000 10.0kb downstream 10.0kb downstream 13692 true Chr12: 2494638-2508329 Glycine max
Glyma.12G033000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2498330-2508329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307869 5265 Fabidae View MSA
124062533 5270 Rosid View MSA
123737163 5271 Pentapetalae View MSA
122793272 5272 Eudicot View MSA
122047570 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0158 0.0 29.7025    
cufflinks 6.72344 0.0 18.8176    
cufflinks 15.3927 0.0 41.1109   High
cufflinks 6.79114 0.0 18.9737    
cufflinks 5.92726 0.0 16.7241    
cufflinks 6.61417 0.0 18.4764    
cufflinks 4.5064 0.0 13.1554   Low
cufflinks 16.0996 0.0 42.9715   High
cufflinks 6.95689 0.0 19.3625    
cufflinks 6.098        
cufflinks 4.396        
cufflinks 8.848     High High
cufflinks 3.621       Low
cufflinks 3.231       Low
cufflinks 5.743     High  
cufflinks 7.073        
cufflinks 2.94       Low
cufflinks 5.332        
cufflinks 4.735        
cufflinks 10.12     High High
cufflinks 4.141        
cufflinks 9.045     High High
cufflinks 6.155        
cufflinks 4.703        
cufflinks 9.248     High High
cufflinks 4.071        

0 Strain