Gene : Glyma.12G033500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15362:SF4 - CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE Genomic Order:  335
Name:  ? Glyma.12G033500 Secondary Identifier:  ? PAC:30548805
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  
Gmax PWY-7625 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G033500 0.5kb upstream 0.5kb upstream 5137 true Chr12: 2520958-2526094 Glycine max
Glyma.12G033500 0.5kb upstream 0.5kb upstream 500 false Chr12: 2520958-2521457 Glycine max
Glyma.12G033500 0.5kb downstream 0.5kb downstream 5137 true Chr12: 2521458-2526594 Glycine max
Glyma.12G033500 0.5kb downstream 0.5kb downstream 500 false Chr12: 2526095-2526594 Glycine max
Glyma.12G033500 1.0kb upstream 1.0kb upstream 5637 true Chr12: 2520458-2526094 Glycine max
Glyma.12G033500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2520458-2521457 Glycine max
Glyma.12G033500 1.0kb downstream 1.0kb downstream 5637 true Chr12: 2521458-2527094 Glycine max
Glyma.12G033500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2526095-2527094 Glycine max
Glyma.12G033500 2.0kb upstream 2.0kb upstream 6637 true Chr12: 2519458-2526094 Glycine max
Glyma.12G033500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2519458-2521457 Glycine max
Glyma.12G033500 2.0kb downstream 2.0kb downstream 6637 true Chr12: 2521458-2528094 Glycine max
Glyma.12G033500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2526095-2528094 Glycine max
Glyma.12G033500 5.0kb upstream 5.0kb upstream 9637 true Chr12: 2516458-2526094 Glycine max
Glyma.12G033500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2516458-2521457 Glycine max
Glyma.12G033500 5.0kb downstream 5.0kb downstream 9637 true Chr12: 2521458-2531094 Glycine max
Glyma.12G033500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2526095-2531094 Glycine max
Glyma.12G033500 10.0kb upstream 10.0kb upstream 14637 true Chr12: 2511458-2526094 Glycine max
Glyma.12G033500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2511458-2521457 Glycine max
Glyma.12G033500 10.0kb downstream 10.0kb downstream 14637 true Chr12: 2521458-2536094 Glycine max
Glyma.12G033500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2526095-2536094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239742 5265 Fabidae Singleton cluster - no MSA
124074338 5270 Rosid View MSA
123738044 5271 Pentapetalae View MSA
122788491 5272 Eudicot View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.73099 0.0 26.8929   Low
cufflinks 11.5086 0.0 51.0211    
cufflinks 9.48872 0.0 40.8584   Low
cufflinks 14.6977 0.0 57.4106    
cufflinks 15.5546 0.0 78.3433    
cufflinks 14.0848 0.0 62.9997    
cufflinks 20.4447 0.0 68.96   High
cufflinks 13.0856 0.0 67.3388    
cufflinks 12.0668 0.0 57.1237    
cufflinks 0.588        
cufflinks 0.184       Low
cufflinks 0.487        
cufflinks 0.663        
cufflinks 0.809       High
cufflinks 0.142       Low
cufflinks 0.465        
cufflinks 0.252        
cufflinks 0.682       High
cufflinks 0.547        
cufflinks 0.504        
cufflinks 0.2       Low
cufflinks 0.477        
cufflinks 0.538        
cufflinks 0.17       Low
cufflinks 0.492        
cufflinks 0.294        

0 Strain