Gene : Glyma.12G036400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13690:SF76 - BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  364
Name:  ? Glyma.12G036400 Secondary Identifier:  ? PAC:30546086
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G036400 0.5kb upstream 0.5kb upstream 5024 true Chr12: 2647501-2652524 Glycine max
Glyma.12G036400 0.5kb upstream 0.5kb upstream 500 false Chr12: 2652025-2652524 Glycine max
Glyma.12G036400 0.5kb downstream 0.5kb downstream 5024 true Chr12: 2647001-2652024 Glycine max
Glyma.12G036400 0.5kb downstream 0.5kb downstream 500 false Chr12: 2647001-2647500 Glycine max
Glyma.12G036400 1.0kb upstream 1.0kb upstream 5524 true Chr12: 2647501-2653024 Glycine max
Glyma.12G036400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2652025-2653024 Glycine max
Glyma.12G036400 1.0kb downstream 1.0kb downstream 5524 true Chr12: 2646501-2652024 Glycine max
Glyma.12G036400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2646501-2647500 Glycine max
Glyma.12G036400 2.0kb upstream 2.0kb upstream 6524 true Chr12: 2647501-2654024 Glycine max
Glyma.12G036400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2652025-2654024 Glycine max
Glyma.12G036400 2.0kb downstream 2.0kb downstream 6524 true Chr12: 2645501-2652024 Glycine max
Glyma.12G036400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2645501-2647500 Glycine max
Glyma.12G036400 5.0kb upstream 5.0kb upstream 9524 true Chr12: 2647501-2657024 Glycine max
Glyma.12G036400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2652025-2657024 Glycine max
Glyma.12G036400 5.0kb downstream 5.0kb downstream 9524 true Chr12: 2642501-2652024 Glycine max
Glyma.12G036400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2642501-2647500 Glycine max
Glyma.12G036400 10.0kb upstream 10.0kb upstream 14524 true Chr12: 2647501-2662024 Glycine max
Glyma.12G036400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2652025-2662024 Glycine max
Glyma.12G036400 10.0kb downstream 10.0kb downstream 14524 true Chr12: 2637501-2652024 Glycine max
Glyma.12G036400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2637501-2647500 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305737 5265 Fabidae View MSA
124066313 5270 Rosid View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.81425 0.0 26.3184   Low
cufflinks 11.4202 0.0 30.523    
cufflinks 12.9792 0.0 34.6332    
cufflinks 13.947 0.0 37.2102    
cufflinks 16.0995 0.0 43.0431    
cufflinks 17.6256 0.0 47.2034    
cufflinks 7.61187 0.0 20.6393   Low
cufflinks 16.861 0.0 45.0975    
cufflinks 17.4578 0.0 46.7353    
cufflinks 10.578     High  
cufflinks 28.612     High High
cufflinks 9.026     High  
cufflinks 7.487     High Low
cufflinks 8.201     High  
cufflinks 21.443     High High
cufflinks 11.948     High  
cufflinks 10.108     High  
cufflinks 10.019     High  
cufflinks 7.186       Low
cufflinks 12.404     High  
cufflinks 27.516     High High
cufflinks 11.705     High  
cufflinks 8.311     High  
cufflinks 16.075     High  
cufflinks 11.775     High  
cufflinks 16.861     High  

0 Strain