Gene : Glyma.12G028000 G. max Wm82.a2.v1
Defline:  (1 of 2) K13153 - U11/U12 small nuclear ribonucleoprotein 25 kDa protein Genomic Order:  280
Name:  ? Glyma.12G028000 Secondary Identifier:  ? PAC:30547612
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G028000 0.5kb upstream 0.5kb upstream 1761 true Chr12: 2081424-2083184 Glycine max
Glyma.12G028000 0.5kb upstream 0.5kb upstream 500 false Chr12: 2081424-2081923 Glycine max
Glyma.12G028000 0.5kb downstream 0.5kb downstream 1761 true Chr12: 2081924-2083684 Glycine max
Glyma.12G028000 0.5kb downstream 0.5kb downstream 500 false Chr12: 2083185-2083684 Glycine max
Glyma.12G028000 1.0kb upstream 1.0kb upstream 2261 true Chr12: 2080924-2083184 Glycine max
Glyma.12G028000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2080924-2081923 Glycine max
Glyma.12G028000 1.0kb downstream 1.0kb downstream 2261 true Chr12: 2081924-2084184 Glycine max
Glyma.12G028000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2083185-2084184 Glycine max
Glyma.12G028000 2.0kb upstream 2.0kb upstream 3261 true Chr12: 2079924-2083184 Glycine max
Glyma.12G028000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2079924-2081923 Glycine max
Glyma.12G028000 2.0kb downstream 2.0kb downstream 3261 true Chr12: 2081924-2085184 Glycine max
Glyma.12G028000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2083185-2085184 Glycine max
Glyma.12G028000 5.0kb upstream 5.0kb upstream 6261 true Chr12: 2076924-2083184 Glycine max
Glyma.12G028000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2076924-2081923 Glycine max
Glyma.12G028000 5.0kb downstream 5.0kb downstream 6261 true Chr12: 2081924-2088184 Glycine max
Glyma.12G028000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2083185-2088184 Glycine max
Glyma.12G028000 10.0kb upstream 10.0kb upstream 11261 true Chr12: 2071924-2083184 Glycine max
Glyma.12G028000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2071924-2081923 Glycine max
Glyma.12G028000 10.0kb downstream 10.0kb downstream 11261 true Chr12: 2081924-2093184 Glycine max
Glyma.12G028000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2083185-2093184 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239927 5265 Fabidae Singleton cluster - no MSA
123985083 5270 Rosid Singleton cluster - no MSA
123752628 5271 Pentapetalae View MSA
122791524 5272 Eudicot View MSA
122043205 5273 Angiosperm View MSA
121348620 5274 Embryophyte View MSA
123380941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.53127 0.0 2.10459    
cufflinks 0.390754 0.0 1.56609    
cufflinks 0.287856 0.0 1.16696    
cufflinks 0.311837 0.0 1.25865    
cufflinks 0.27327 0.0 1.11012    
cufflinks 1.10699 0.0 4.26038   High
cufflinks 0.335419 0.0 1.34988    
cufflinks 0.378355 0.0 1.51515    
cufflinks 0.261453 0.0 1.06517    
cufflinks 0.566        
cufflinks 0.364       Low
cufflinks 0.647        
cufflinks 0.778        
cufflinks 1.024        
cufflinks 0.419       Low
cufflinks 1.785       High
cufflinks 0.303       Low
cufflinks 1.377        
cufflinks 1.55        
cufflinks 1.882       High
cufflinks 0.319       Low
cufflinks 1.775       High
cufflinks 1.72        
cufflinks 0.891        
cufflinks 2.15       High
cufflinks 0.39       Low

0 Strain