Gene : Glyma.12G028200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10774//PTHR10774:SF82 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  282
Name:  ? Glyma.12G028200 Secondary Identifier:  ? PAC:30548061
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G028200 0.5kb upstream 0.5kb upstream 7471 true Chr12: 2101013-2108483 Glycine max
Glyma.12G028200 0.5kb upstream 0.5kb upstream 500 false Chr12: 2107984-2108483 Glycine max
Glyma.12G028200 0.5kb downstream 0.5kb downstream 7471 true Chr12: 2100513-2107983 Glycine max
Glyma.12G028200 0.5kb downstream 0.5kb downstream 500 false Chr12: 2100513-2101012 Glycine max
Glyma.12G028200 1.0kb upstream 1.0kb upstream 7971 true Chr12: 2101013-2108983 Glycine max
Glyma.12G028200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 2107984-2108983 Glycine max
Glyma.12G028200 1.0kb downstream 1.0kb downstream 7971 true Chr12: 2100013-2107983 Glycine max
Glyma.12G028200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 2100013-2101012 Glycine max
Glyma.12G028200 2.0kb upstream 2.0kb upstream 8971 true Chr12: 2101013-2109983 Glycine max
Glyma.12G028200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 2107984-2109983 Glycine max
Glyma.12G028200 2.0kb downstream 2.0kb downstream 8971 true Chr12: 2099013-2107983 Glycine max
Glyma.12G028200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 2099013-2101012 Glycine max
Glyma.12G028200 5.0kb upstream 5.0kb upstream 11971 true Chr12: 2101013-2112983 Glycine max
Glyma.12G028200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 2107984-2112983 Glycine max
Glyma.12G028200 5.0kb downstream 5.0kb downstream 11971 true Chr12: 2096013-2107983 Glycine max
Glyma.12G028200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 2096013-2101012 Glycine max
Glyma.12G028200 10.0kb upstream 10.0kb upstream 16971 true Chr12: 2101013-2117983 Glycine max
Glyma.12G028200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 2107984-2117983 Glycine max
Glyma.12G028200 10.0kb downstream 10.0kb downstream 16971 true Chr12: 2091013-2107983 Glycine max
Glyma.12G028200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 2091013-2101012 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303586 5265 Fabidae View MSA
124061205 5270 Rosid View MSA
123738093 5271 Pentapetalae View MSA
122787602 5272 Eudicot View MSA
122047989 5273 Angiosperm View MSA
121348043 5274 Embryophyte View MSA
123426987 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.63543 0.0 39.1871   High
cufflinks 3.19241 0.0 15.7291   Low
cufflinks 7.06271 0.0 29.7125    
cufflinks 7.46685 0.0 32.1967   High
cufflinks 3.54059 0.0 12.597    
cufflinks 4.91189 0.0 22.1755    
cufflinks 4.03392 0.0 16.174    
cufflinks 4.91842 0.0 18.6448    
cufflinks 3.4695 0.0 15.9261    
cufflinks 2.528       High
cufflinks 0.237       Low
cufflinks 1.405        
cufflinks 0.688        
cufflinks 0.476        
cufflinks 0.429        
cufflinks 0.994        
cufflinks 9.442     High High
cufflinks 1.168        
cufflinks 0.716        
cufflinks 1.217        
cufflinks 0.319       Low
cufflinks 1.263        
cufflinks 2.658       High
cufflinks 0.266       Low
cufflinks 1.076        
cufflinks 1.98        

0 Strain