Gene : Glyma.12G076100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12634:SF8 - PROTEIN SAPS-1, ISOFORM C Genomic Order:  761
Name:  ? Glyma.12G076100 Secondary Identifier:  ? PAC:30548680
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G076100 0.5kb upstream 0.5kb upstream 9919 true Chr12: 5832880-5842798 Glycine max
Glyma.12G076100 0.5kb upstream 0.5kb upstream 500 false Chr12: 5832880-5833379 Glycine max
Glyma.12G076100 0.5kb downstream 0.5kb downstream 9919 true Chr12: 5833380-5843298 Glycine max
Glyma.12G076100 0.5kb downstream 0.5kb downstream 500 false Chr12: 5842799-5843298 Glycine max
Glyma.12G076100 1.0kb upstream 1.0kb upstream 10419 true Chr12: 5832380-5842798 Glycine max
Glyma.12G076100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5832380-5833379 Glycine max
Glyma.12G076100 1.0kb downstream 1.0kb downstream 10419 true Chr12: 5833380-5843798 Glycine max
Glyma.12G076100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5842799-5843798 Glycine max
Glyma.12G076100 2.0kb upstream 2.0kb upstream 11419 true Chr12: 5831380-5842798 Glycine max
Glyma.12G076100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5831380-5833379 Glycine max
Glyma.12G076100 2.0kb downstream 2.0kb downstream 11419 true Chr12: 5833380-5844798 Glycine max
Glyma.12G076100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5842799-5844798 Glycine max
Glyma.12G076100 5.0kb upstream 5.0kb upstream 14419 true Chr12: 5828380-5842798 Glycine max
Glyma.12G076100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5828380-5833379 Glycine max
Glyma.12G076100 5.0kb downstream 5.0kb downstream 14419 true Chr12: 5833380-5847798 Glycine max
Glyma.12G076100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5842799-5847798 Glycine max
Glyma.12G076100 10.0kb upstream 10.0kb upstream 19419 true Chr12: 5823380-5842798 Glycine max
Glyma.12G076100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5823380-5833379 Glycine max
Glyma.12G076100 10.0kb downstream 10.0kb downstream 19419 true Chr12: 5833380-5852798 Glycine max
Glyma.12G076100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5842799-5852798 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312894 5265 Fabidae View MSA
124069403 5270 Rosid View MSA
123742234 5271 Pentapetalae View MSA
122794805 5272 Eudicot View MSA
122051052 5273 Angiosperm View MSA
121347725 5274 Embryophyte View MSA
123428189 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5921 0.0 36.3854    
cufflinks 12.0533 0.0 32.1927    
cufflinks 15.8652 0.0 42.787   High
cufflinks 11.5574 0.0 30.8512    
cufflinks 12.5046 0.0 33.4033    
cufflinks 11.2511 0.0 30.024    
cufflinks 17.2557 0.0 46.576   High
cufflinks 13.3919 0.0 35.8545    
cufflinks 10.7397 0.0 28.6534   Low
cufflinks 3.82       Low
cufflinks 5.55     High  
cufflinks 5.67        
cufflinks 5.035        
cufflinks 5.589        
cufflinks 5.677     High  
cufflinks 5.451        
cufflinks 4.304       Low
cufflinks 6.283       High
cufflinks 5.574        
cufflinks 5.419        
cufflinks 5.68        
cufflinks 5.544        
cufflinks 5.524        
cufflinks 5.66        
cufflinks 5.108        
cufflinks 5.934        

0 Strain