Gene : Glyma.12G076200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31384:SF27 - AUXIN RESPONSE FACTOR 10-RELATED Genomic Order:  762
Name:  ? Glyma.12G076200 Secondary Identifier:  ? PAC:30547185
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G076200 0.5kb upstream 0.5kb upstream 4332 true Chr12: 5851956-5856287 Glycine max
Glyma.12G076200 0.5kb upstream 0.5kb upstream 500 false Chr12: 5855788-5856287 Glycine max
Glyma.12G076200 0.5kb downstream 0.5kb downstream 4332 true Chr12: 5851456-5855787 Glycine max
Glyma.12G076200 0.5kb downstream 0.5kb downstream 500 false Chr12: 5851456-5851955 Glycine max
Glyma.12G076200 1.0kb upstream 1.0kb upstream 4832 true Chr12: 5851956-5856787 Glycine max
Glyma.12G076200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5855788-5856787 Glycine max
Glyma.12G076200 1.0kb downstream 1.0kb downstream 4832 true Chr12: 5850956-5855787 Glycine max
Glyma.12G076200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5850956-5851955 Glycine max
Glyma.12G076200 2.0kb upstream 2.0kb upstream 5832 true Chr12: 5851956-5857787 Glycine max
Glyma.12G076200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5855788-5857787 Glycine max
Glyma.12G076200 2.0kb downstream 2.0kb downstream 5832 true Chr12: 5849956-5855787 Glycine max
Glyma.12G076200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5849956-5851955 Glycine max
Glyma.12G076200 5.0kb upstream 5.0kb upstream 8832 true Chr12: 5851956-5860787 Glycine max
Glyma.12G076200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5855788-5860787 Glycine max
Glyma.12G076200 5.0kb downstream 5.0kb downstream 8832 true Chr12: 5846956-5855787 Glycine max
Glyma.12G076200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5846956-5851955 Glycine max
Glyma.12G076200 10.0kb upstream 10.0kb upstream 13832 true Chr12: 5851956-5865787 Glycine max
Glyma.12G076200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5855788-5865787 Glycine max
Glyma.12G076200 10.0kb downstream 10.0kb downstream 13832 true Chr12: 5841956-5855787 Glycine max
Glyma.12G076200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5841956-5851955 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309407 5265 Fabidae View MSA
124069871 5270 Rosid View MSA
123753762 5271 Pentapetalae View MSA
122789105 5272 Eudicot View MSA
122049915 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.18675 0.0 16.7292    
cufflinks 5.49876 0.0 14.9865    
cufflinks 2.98988 0.0 8.6325    
cufflinks 10.9236 0.0 29.147   High
cufflinks 3.63783 0.0 10.251    
cufflinks 4.58156 0.0 12.6376    
cufflinks 16.026 0.0 43.1857   High
cufflinks 6.38282 0.0 17.2332    
cufflinks 2.12783 0.0 6.41976   Low
cufflinks 2.292        
cufflinks 0.396       Low
cufflinks 4.788        
cufflinks 4.413        
cufflinks 7.39     High  
cufflinks 0.488       Low
cufflinks 9.354     High  
cufflinks 0.403       Low
cufflinks 8.792     High  
cufflinks 6.412        
cufflinks 6.879     High  
cufflinks 0.353       Low
cufflinks 9.098     High  
cufflinks 7.907     High  
cufflinks 0.68        
cufflinks 8.198     High  
cufflinks 0.589       Low

0 Strain