Gene : Glyma.12G067300 G. max Wm82.a2.v1
Defline:  (1 of 16) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  673
Name:  ? Glyma.12G067300 Secondary Identifier:  ? PAC:30548363
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G067300 0.5kb upstream 0.5kb upstream 2722 true Chr12: 4932398-4935119 Glycine max
Glyma.12G067300 0.5kb upstream 0.5kb upstream 500 false Chr12: 4932398-4932897 Glycine max
Glyma.12G067300 0.5kb downstream 0.5kb downstream 2722 true Chr12: 4932898-4935619 Glycine max
Glyma.12G067300 0.5kb downstream 0.5kb downstream 500 false Chr12: 4935120-4935619 Glycine max
Glyma.12G067300 1.0kb upstream 1.0kb upstream 3222 true Chr12: 4931898-4935119 Glycine max
Glyma.12G067300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4931898-4932897 Glycine max
Glyma.12G067300 1.0kb downstream 1.0kb downstream 3222 true Chr12: 4932898-4936119 Glycine max
Glyma.12G067300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4935120-4936119 Glycine max
Glyma.12G067300 2.0kb upstream 2.0kb upstream 4222 true Chr12: 4930898-4935119 Glycine max
Glyma.12G067300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4930898-4932897 Glycine max
Glyma.12G067300 2.0kb downstream 2.0kb downstream 4222 true Chr12: 4932898-4937119 Glycine max
Glyma.12G067300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4935120-4937119 Glycine max
Glyma.12G067300 5.0kb upstream 5.0kb upstream 7222 true Chr12: 4927898-4935119 Glycine max
Glyma.12G067300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4927898-4932897 Glycine max
Glyma.12G067300 5.0kb downstream 5.0kb downstream 7222 true Chr12: 4932898-4940119 Glycine max
Glyma.12G067300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4935120-4940119 Glycine max
Glyma.12G067300 10.0kb upstream 10.0kb upstream 12222 true Chr12: 4922898-4935119 Glycine max
Glyma.12G067300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4922898-4932897 Glycine max
Glyma.12G067300 10.0kb downstream 10.0kb downstream 12222 true Chr12: 4932898-4945119 Glycine max
Glyma.12G067300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4935120-4945119 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305632 5265 Fabidae View MSA
124050338 5270 Rosid View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1107 0.0 3.81226    
cufflinks 1.30279 0.0 4.39102   High
cufflinks 0.423126 0.0 1.55658   Low
cufflinks 0.677376 0.0 2.4219    
cufflinks 0.891632 0.0 3.12541    
cufflinks 0.666945 0.0 2.38772    
cufflinks 1.29221 0.0 4.36598   High
cufflinks 0.62893 0.0 2.26194    
cufflinks 1.11438 0.0 3.82182    
cufflinks 0.365       Low
cufflinks 0.352       Low
cufflinks 0.987        
cufflinks 1.271       High
cufflinks 1.754       High
cufflinks 0.484        
cufflinks 1.029        
cufflinks 0.543        
cufflinks 1.081        
cufflinks 0.917        
cufflinks 0.793        
cufflinks 0.43        
cufflinks 0.97        
cufflinks 1.269       High
cufflinks 0.328       Low
cufflinks 0.851        
cufflinks 0.414       Low

0 Strain