Gene : Glyma.12G068500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24347:SF1 - PROTEIN CKK-1, ISOFORM B Genomic Order:  685
Name:  ? Glyma.12G068500 Secondary Identifier:  ? PAC:30547475
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G068500 0.5kb upstream 0.5kb upstream 7779 true Chr12: 5035420-5043198 Glycine max
Glyma.12G068500 0.5kb upstream 0.5kb upstream 500 false Chr12: 5042699-5043198 Glycine max
Glyma.12G068500 0.5kb downstream 0.5kb downstream 7779 true Chr12: 5034920-5042698 Glycine max
Glyma.12G068500 0.5kb downstream 0.5kb downstream 500 false Chr12: 5034920-5035419 Glycine max
Glyma.12G068500 1.0kb upstream 1.0kb upstream 8279 true Chr12: 5035420-5043698 Glycine max
Glyma.12G068500 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5042699-5043698 Glycine max
Glyma.12G068500 1.0kb downstream 1.0kb downstream 8279 true Chr12: 5034420-5042698 Glycine max
Glyma.12G068500 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5034420-5035419 Glycine max
Glyma.12G068500 2.0kb upstream 2.0kb upstream 9279 true Chr12: 5035420-5044698 Glycine max
Glyma.12G068500 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5042699-5044698 Glycine max
Glyma.12G068500 2.0kb downstream 2.0kb downstream 9279 true Chr12: 5033420-5042698 Glycine max
Glyma.12G068500 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5033420-5035419 Glycine max
Glyma.12G068500 5.0kb upstream 5.0kb upstream 12279 true Chr12: 5035420-5047698 Glycine max
Glyma.12G068500 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5042699-5047698 Glycine max
Glyma.12G068500 5.0kb downstream 5.0kb downstream 12279 true Chr12: 5030420-5042698 Glycine max
Glyma.12G068500 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5030420-5035419 Glycine max
Glyma.12G068500 10.0kb upstream 10.0kb upstream 17279 true Chr12: 5035420-5052698 Glycine max
Glyma.12G068500 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5042699-5052698 Glycine max
Glyma.12G068500 10.0kb downstream 10.0kb downstream 17279 true Chr12: 5025420-5042698 Glycine max
Glyma.12G068500 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5025420-5035419 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309675 5265 Fabidae View MSA
124062424 5270 Rosid View MSA
123753521 5271 Pentapetalae View MSA
122797928 5272 Eudicot View MSA
122051434 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.235 0.0 50.9367   High
cufflinks 7.95434 0.0 31.7512   Low
cufflinks 12.252 0.0 47.4582   High
cufflinks 8.61666 0.0 34.2722    
cufflinks 8.73383 0.0 34.8733    
cufflinks 9.94808 0.0 39.0432    
cufflinks 10.8014 0.0 42.1193    
cufflinks 9.18857 0.0 36.3203    
cufflinks 11.4224 0.0 43.8969    
cufflinks 0.642       Low
cufflinks 1.69       High
cufflinks 0.878        
cufflinks 0.891        
cufflinks 1.055        
cufflinks 1.253        
cufflinks 0.937        
cufflinks 0.573       Low
cufflinks 0.957        
cufflinks 0.821        
cufflinks 1.046        
cufflinks 0.861        
cufflinks 1.131        
cufflinks 0.96        
cufflinks 1.72       High
cufflinks 0.934        
cufflinks 0.683       Low

0 Strain