Gene : Glyma.12G068900 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  689
Name:  ? Glyma.12G068900 Secondary Identifier:  ? PAC:30548630
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G068900 0.5kb upstream 0.5kb upstream 1614 true Chr12: 5053020-5054633 Glycine max
Glyma.12G068900 0.5kb upstream 0.5kb upstream 500 false Chr12: 5054134-5054633 Glycine max
Glyma.12G068900 0.5kb downstream 0.5kb downstream 1614 true Chr12: 5052520-5054133 Glycine max
Glyma.12G068900 0.5kb downstream 0.5kb downstream 500 false Chr12: 5052520-5053019 Glycine max
Glyma.12G068900 1.0kb upstream 1.0kb upstream 2114 true Chr12: 5053020-5055133 Glycine max
Glyma.12G068900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5054134-5055133 Glycine max
Glyma.12G068900 1.0kb downstream 1.0kb downstream 2114 true Chr12: 5052020-5054133 Glycine max
Glyma.12G068900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5052020-5053019 Glycine max
Glyma.12G068900 2.0kb upstream 2.0kb upstream 3114 true Chr12: 5053020-5056133 Glycine max
Glyma.12G068900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5054134-5056133 Glycine max
Glyma.12G068900 2.0kb downstream 2.0kb downstream 3114 true Chr12: 5051020-5054133 Glycine max
Glyma.12G068900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5051020-5053019 Glycine max
Glyma.12G068900 5.0kb upstream 5.0kb upstream 6114 true Chr12: 5053020-5059133 Glycine max
Glyma.12G068900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5054134-5059133 Glycine max
Glyma.12G068900 5.0kb downstream 5.0kb downstream 6114 true Chr12: 5048020-5054133 Glycine max
Glyma.12G068900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5048020-5053019 Glycine max
Glyma.12G068900 10.0kb upstream 10.0kb upstream 11114 true Chr12: 5053020-5064133 Glycine max
Glyma.12G068900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5054134-5064133 Glycine max
Glyma.12G068900 10.0kb downstream 10.0kb downstream 11114 true Chr12: 5043020-5054133 Glycine max
Glyma.12G068900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5043020-5053019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.04012 0.0 7.16277    
cufflinks 0.506184 0.0 1.92378    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0364364 0.0 0.157827 Low Low
cufflinks 9.68636 0.0 27.9017    
cufflinks 0.0424466 0.0 0.181906 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 56.9396 0.0 154.594 High High
cufflinks 6.96297 0.0 20.8931    
cufflinks 7.024        
cufflinks 1.383        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low Low
cufflinks 23.818     High High
cufflinks 0.029     Low Low
cufflinks 0.232        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.63        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.994        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.627        

0 Strain