Gene : Glyma.12G069300 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  693
Name:  ? Glyma.12G069300 Secondary Identifier:  ? PAC:30545845
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G069300 0.5kb upstream 0.5kb upstream 1931 true Chr12: 5080548-5082478 Glycine max
Glyma.12G069300 0.5kb upstream 0.5kb upstream 500 false Chr12: 5080548-5081047 Glycine max
Glyma.12G069300 0.5kb downstream 0.5kb downstream 1931 true Chr12: 5081048-5082978 Glycine max
Glyma.12G069300 0.5kb downstream 0.5kb downstream 500 false Chr12: 5082479-5082978 Glycine max
Glyma.12G069300 1.0kb upstream 1.0kb upstream 2431 true Chr12: 5080048-5082478 Glycine max
Glyma.12G069300 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5080048-5081047 Glycine max
Glyma.12G069300 1.0kb downstream 1.0kb downstream 2431 true Chr12: 5081048-5083478 Glycine max
Glyma.12G069300 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5082479-5083478 Glycine max
Glyma.12G069300 2.0kb upstream 2.0kb upstream 3431 true Chr12: 5079048-5082478 Glycine max
Glyma.12G069300 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5079048-5081047 Glycine max
Glyma.12G069300 2.0kb downstream 2.0kb downstream 3431 true Chr12: 5081048-5084478 Glycine max
Glyma.12G069300 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5082479-5084478 Glycine max
Glyma.12G069300 5.0kb upstream 5.0kb upstream 6431 true Chr12: 5076048-5082478 Glycine max
Glyma.12G069300 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5076048-5081047 Glycine max
Glyma.12G069300 5.0kb downstream 5.0kb downstream 6431 true Chr12: 5081048-5087478 Glycine max
Glyma.12G069300 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5082479-5087478 Glycine max
Glyma.12G069300 10.0kb upstream 10.0kb upstream 11431 true Chr12: 5071048-5082478 Glycine max
Glyma.12G069300 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5071048-5081047 Glycine max
Glyma.12G069300 10.0kb downstream 10.0kb downstream 11431 true Chr12: 5081048-5092478 Glycine max
Glyma.12G069300 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5082479-5092478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314337 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.75064 0.0 14.5358    
cufflinks 54.8867 0.0 150.879 High  
cufflinks 3.35425 0.0 10.8525    
cufflinks 42.4734 0.0 114.857 High  
cufflinks 12.225 0.0 33.4696    
cufflinks 2.61991 0.0 8.70689    
cufflinks 0.136875 0.0 0.542521 Low Low
cufflinks 93.0654 0.0 272.492 High High
cufflinks 12.3042 0.0 33.7106    
cufflinks 15.604     High High
cufflinks 0.4       Low
cufflinks 1.42        
cufflinks 3.601        
cufflinks 1.035        
cufflinks 0.209       Low
cufflinks 7.705     High  
cufflinks 4.404        
cufflinks 1.585        
cufflinks 35.383     High High
cufflinks 1.324        
cufflinks 0.925        
cufflinks 3.002        
cufflinks 3.82        
cufflinks 0.444       Low
cufflinks 3.925        
cufflinks 1.078        

0 Strain