Gene : Glyma.12G069800 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  698
Name:  ? Glyma.12G069800 Secondary Identifier:  ? PAC:30545913
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G069800 0.5kb upstream 0.5kb upstream 1777 true Chr12: 5105383-5107159 Glycine max
Glyma.12G069800 0.5kb upstream 0.5kb upstream 500 false Chr12: 5106660-5107159 Glycine max
Glyma.12G069800 0.5kb downstream 0.5kb downstream 1777 true Chr12: 5104883-5106659 Glycine max
Glyma.12G069800 0.5kb downstream 0.5kb downstream 500 false Chr12: 5104883-5105382 Glycine max
Glyma.12G069800 1.0kb upstream 1.0kb upstream 2277 true Chr12: 5105383-5107659 Glycine max
Glyma.12G069800 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5106660-5107659 Glycine max
Glyma.12G069800 1.0kb downstream 1.0kb downstream 2277 true Chr12: 5104383-5106659 Glycine max
Glyma.12G069800 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5104383-5105382 Glycine max
Glyma.12G069800 2.0kb upstream 2.0kb upstream 3277 true Chr12: 5105383-5108659 Glycine max
Glyma.12G069800 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5106660-5108659 Glycine max
Glyma.12G069800 2.0kb downstream 2.0kb downstream 3277 true Chr12: 5103383-5106659 Glycine max
Glyma.12G069800 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5103383-5105382 Glycine max
Glyma.12G069800 5.0kb upstream 5.0kb upstream 6277 true Chr12: 5105383-5111659 Glycine max
Glyma.12G069800 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5106660-5111659 Glycine max
Glyma.12G069800 5.0kb downstream 5.0kb downstream 6277 true Chr12: 5100383-5106659 Glycine max
Glyma.12G069800 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5100383-5105382 Glycine max
Glyma.12G069800 10.0kb upstream 10.0kb upstream 11277 true Chr12: 5105383-5116659 Glycine max
Glyma.12G069800 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5106660-5116659 Glycine max
Glyma.12G069800 10.0kb downstream 10.0kb downstream 11277 true Chr12: 5095383-5106659 Glycine max
Glyma.12G069800 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5095383-5105382 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297718 5265 Fabidae View MSA
124062228 5270 Rosid View MSA
123750165 5271 Pentapetalae View MSA
122791630 5272 Eudicot View MSA
122047379 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.480088 0.0 1.81403    
cufflinks 0.215891 0.0 0.844173 Low  
cufflinks 0.0456818 0.0 0.192123 Low  
cufflinks 0.698253 0.0 2.59026    
cufflinks 4.78049 0.0 14.714    
cufflinks 0.0319064 0.0 0.137741 Low Low
cufflinks 0.0107507 0.0 0.0513829 Low Low
cufflinks 24.0668 0.0 64.2345 High High
cufflinks 3.22901 0.0 10.5097    
cufflinks 0.408        
cufflinks 0.145        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.679       High
cufflinks 0.008     Low Low
cufflinks 0.037     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.155        
cufflinks 0.03     Low  
cufflinks 0.295        

0 Strain