Gene : Glyma.12G070100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14428 - NUCLEOLAR COMPLEX PROTEIN 3 Genomic Order:  701
Name:  ? Glyma.12G070100 Secondary Identifier:  ? PAC:30546880
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G070100 0.5kb upstream 0.5kb upstream 9828 true Chr12: 5117510-5127337 Glycine max
Glyma.12G070100 0.5kb upstream 0.5kb upstream 500 false Chr12: 5117510-5118009 Glycine max
Glyma.12G070100 0.5kb downstream 0.5kb downstream 9828 true Chr12: 5118010-5127837 Glycine max
Glyma.12G070100 0.5kb downstream 0.5kb downstream 500 false Chr12: 5127338-5127837 Glycine max
Glyma.12G070100 1.0kb upstream 1.0kb upstream 10328 true Chr12: 5117010-5127337 Glycine max
Glyma.12G070100 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5117010-5118009 Glycine max
Glyma.12G070100 1.0kb downstream 1.0kb downstream 10328 true Chr12: 5118010-5128337 Glycine max
Glyma.12G070100 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5127338-5128337 Glycine max
Glyma.12G070100 2.0kb upstream 2.0kb upstream 11328 true Chr12: 5116010-5127337 Glycine max
Glyma.12G070100 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5116010-5118009 Glycine max
Glyma.12G070100 2.0kb downstream 2.0kb downstream 11328 true Chr12: 5118010-5129337 Glycine max
Glyma.12G070100 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5127338-5129337 Glycine max
Glyma.12G070100 5.0kb upstream 5.0kb upstream 14328 true Chr12: 5113010-5127337 Glycine max
Glyma.12G070100 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5113010-5118009 Glycine max
Glyma.12G070100 5.0kb downstream 5.0kb downstream 14328 true Chr12: 5118010-5132337 Glycine max
Glyma.12G070100 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5127338-5132337 Glycine max
Glyma.12G070100 10.0kb upstream 10.0kb upstream 19328 true Chr12: 5108010-5127337 Glycine max
Glyma.12G070100 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5108010-5118009 Glycine max
Glyma.12G070100 10.0kb downstream 10.0kb downstream 19328 true Chr12: 5118010-5137337 Glycine max
Glyma.12G070100 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5127338-5137337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300383 5265 Fabidae View MSA
124068176 5270 Rosid View MSA
123740562 5271 Pentapetalae View MSA
122786357 5272 Eudicot View MSA
122041726 5273 Angiosperm View MSA
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.54835 0.0 36.1008   High
cufflinks 6.39102 0.0 24.7205    
cufflinks 4.37234 0.0 17.7684   Low
cufflinks 5.48103 0.0 21.5839    
cufflinks 7.24494 0.0 25.4819    
cufflinks 5.13836 0.0 20.5236    
cufflinks 4.59419 0.0 18.7713   Low
cufflinks 6.65467 0.0 25.66    
cufflinks 6.80103 0.0 26.1844    
cufflinks 0.742        
cufflinks 0.258       Low
cufflinks 0.785        
cufflinks 1.547       High
cufflinks 1.665       High
cufflinks 0.493        
cufflinks 0.751        
cufflinks 0.675        
cufflinks 0.818        
cufflinks 1.062        
cufflinks 0.52        
cufflinks 0.463        
cufflinks 0.62        
cufflinks 1.076        
cufflinks 0.321       Low
cufflinks 0.618        
cufflinks 0.656        

0 Strain