Gene : Glyma.12G070200 G. max Wm82.a2.v1
Defline:  (1 of 35) PTHR32077:SF7 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 Genomic Order:  702
Name:  ? Glyma.12G070200 Secondary Identifier:  ? PAC:30547781
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G070200 0.5kb upstream 0.5kb upstream 2094 true Chr12: 5129441-5131534 Glycine max
Glyma.12G070200 0.5kb upstream 0.5kb upstream 500 false Chr12: 5129441-5129940 Glycine max
Glyma.12G070200 0.5kb downstream 0.5kb downstream 2094 true Chr12: 5129941-5132034 Glycine max
Glyma.12G070200 0.5kb downstream 0.5kb downstream 500 false Chr12: 5131535-5132034 Glycine max
Glyma.12G070200 1.0kb upstream 1.0kb upstream 2594 true Chr12: 5128941-5131534 Glycine max
Glyma.12G070200 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5128941-5129940 Glycine max
Glyma.12G070200 1.0kb downstream 1.0kb downstream 2594 true Chr12: 5129941-5132534 Glycine max
Glyma.12G070200 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5131535-5132534 Glycine max
Glyma.12G070200 2.0kb upstream 2.0kb upstream 3594 true Chr12: 5127941-5131534 Glycine max
Glyma.12G070200 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5127941-5129940 Glycine max
Glyma.12G070200 2.0kb downstream 2.0kb downstream 3594 true Chr12: 5129941-5133534 Glycine max
Glyma.12G070200 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5131535-5133534 Glycine max
Glyma.12G070200 5.0kb upstream 5.0kb upstream 6594 true Chr12: 5124941-5131534 Glycine max
Glyma.12G070200 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5124941-5129940 Glycine max
Glyma.12G070200 5.0kb downstream 5.0kb downstream 6594 true Chr12: 5129941-5136534 Glycine max
Glyma.12G070200 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5131535-5136534 Glycine max
Glyma.12G070200 10.0kb upstream 10.0kb upstream 11594 true Chr12: 5119941-5131534 Glycine max
Glyma.12G070200 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5119941-5129940 Glycine max
Glyma.12G070200 10.0kb downstream 10.0kb downstream 11594 true Chr12: 5129941-5141534 Glycine max
Glyma.12G070200 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5131535-5141534 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031651 5273 Angiosperm View MSA
122297659 5265 Fabidae View MSA
124075064 5270 Rosid View MSA
123628735 5271 Pentapetalae View MSA
122662989 5272 Eudicot View MSA
121300660 5274 Embryophyte View MSA
123338397 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.208179 0.0 0.80981 Low  
cufflinks 0.0976357 0.0 0.39035 Low  
cufflinks 0.0412942 0.0 0.172283 Low  
cufflinks 0.0173767 0.0 0.0778089 Low Low
cufflinks 1.81483 0.0 6.22183    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.553268 0.0 2.06126    
cufflinks 11.2063 0.0 30.631   High
cufflinks 1.94746 0.0 6.61458    
cufflinks 0.322        
cufflinks 0.133        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.552       High
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.307        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.279        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.219        

0 Strain