Gene : Glyma.12G071000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Genomic Order:  710
Name:  ? Glyma.12G071000 Secondary Identifier:  ? PAC:30548275
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G071000 0.5kb upstream 0.5kb upstream 7935 true Chr12: 5196712-5204646 Glycine max
Glyma.12G071000 0.5kb upstream 0.5kb upstream 500 false Chr12: 5196712-5197211 Glycine max
Glyma.12G071000 0.5kb downstream 0.5kb downstream 7935 true Chr12: 5197212-5205146 Glycine max
Glyma.12G071000 0.5kb downstream 0.5kb downstream 500 false Chr12: 5204647-5205146 Glycine max
Glyma.12G071000 1.0kb upstream 1.0kb upstream 8435 true Chr12: 5196212-5204646 Glycine max
Glyma.12G071000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5196212-5197211 Glycine max
Glyma.12G071000 1.0kb downstream 1.0kb downstream 8435 true Chr12: 5197212-5205646 Glycine max
Glyma.12G071000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5204647-5205646 Glycine max
Glyma.12G071000 2.0kb upstream 2.0kb upstream 9435 true Chr12: 5195212-5204646 Glycine max
Glyma.12G071000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5195212-5197211 Glycine max
Glyma.12G071000 2.0kb downstream 2.0kb downstream 9435 true Chr12: 5197212-5206646 Glycine max
Glyma.12G071000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5204647-5206646 Glycine max
Glyma.12G071000 5.0kb upstream 5.0kb upstream 12435 true Chr12: 5192212-5204646 Glycine max
Glyma.12G071000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5192212-5197211 Glycine max
Glyma.12G071000 5.0kb downstream 5.0kb downstream 12435 true Chr12: 5197212-5209646 Glycine max
Glyma.12G071000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5204647-5209646 Glycine max
Glyma.12G071000 10.0kb upstream 10.0kb upstream 17435 true Chr12: 5187212-5204646 Glycine max
Glyma.12G071000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5187212-5197211 Glycine max
Glyma.12G071000 10.0kb downstream 10.0kb downstream 17435 true Chr12: 5197212-5214646 Glycine max
Glyma.12G071000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5204647-5214646 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310336 5265 Fabidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.26369 0.0 15.0141    
cufflinks 10.8867 0.0 41.5589   High
cufflinks 1.35341 0.0 9.50625    
cufflinks 10.546 0.0 38.0407   High
cufflinks 1.27834 0.0 11.945    
cufflinks 0.25639 0.0 8.15488 Low Low
cufflinks 3.27536 0.0 14.7815    
cufflinks 8.17639 0.0 30.0039    
cufflinks 1.18242 0.0 9.88788    
cufflinks 3.988       High
cufflinks 0.028     Low Low
cufflinks 1.15        
cufflinks 0.162        
cufflinks 0.055     Low Low
cufflinks 0.195        
cufflinks 1.614        
cufflinks 0.239        
cufflinks 1.883        
cufflinks 2.632       High
cufflinks 1.487        
cufflinks 0.098        
cufflinks 1.773        
cufflinks 1.792        
cufflinks 0.049     Low Low
cufflinks 1.474        
cufflinks 0.153        

0 Strain