Gene : Glyma.12G072000 G. max Wm82.a2.v1
Defline:  (1 of 91) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  720
Name:  ? Glyma.12G072000 Secondary Identifier:  ? PAC:30546309
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G072000 0.5kb upstream 0.5kb upstream 2608 true Chr12: 5293321-5295928 Glycine max
Glyma.12G072000 0.5kb upstream 0.5kb upstream 500 false Chr12: 5295429-5295928 Glycine max
Glyma.12G072000 0.5kb downstream 0.5kb downstream 2608 true Chr12: 5292821-5295428 Glycine max
Glyma.12G072000 0.5kb downstream 0.5kb downstream 500 false Chr12: 5292821-5293320 Glycine max
Glyma.12G072000 1.0kb upstream 1.0kb upstream 3108 true Chr12: 5293321-5296428 Glycine max
Glyma.12G072000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5295429-5296428 Glycine max
Glyma.12G072000 1.0kb downstream 1.0kb downstream 3108 true Chr12: 5292321-5295428 Glycine max
Glyma.12G072000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5292321-5293320 Glycine max
Glyma.12G072000 2.0kb upstream 2.0kb upstream 4108 true Chr12: 5293321-5297428 Glycine max
Glyma.12G072000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5295429-5297428 Glycine max
Glyma.12G072000 2.0kb downstream 2.0kb downstream 4108 true Chr12: 5291321-5295428 Glycine max
Glyma.12G072000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5291321-5293320 Glycine max
Glyma.12G072000 5.0kb upstream 5.0kb upstream 7108 true Chr12: 5293321-5300428 Glycine max
Glyma.12G072000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5295429-5300428 Glycine max
Glyma.12G072000 5.0kb downstream 5.0kb downstream 7108 true Chr12: 5288321-5295428 Glycine max
Glyma.12G072000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5288321-5293320 Glycine max
Glyma.12G072000 10.0kb upstream 10.0kb upstream 12108 true Chr12: 5293321-5305428 Glycine max
Glyma.12G072000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5295429-5305428 Glycine max
Glyma.12G072000 10.0kb downstream 10.0kb downstream 12108 true Chr12: 5283321-5295428 Glycine max
Glyma.12G072000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5283321-5293320 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301117 5265 Fabidae View MSA
124072229 5270 Rosid View MSA
123742665 5271 Pentapetalae View MSA
122789908 5272 Eudicot View MSA
122042687 5273 Angiosperm View MSA
121310001 5274 Embryophyte View MSA
123347609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.40824 0.0 5.04628    
cufflinks 0.217029 0.0 0.850869 Low Low
cufflinks 3.71963 0.0 11.9909   High
cufflinks 0.538081 0.0 2.0291    
cufflinks 1.16044 0.0 4.21175    
cufflinks 1.0745 0.0 3.91666    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.47496 0.0 5.25144    
cufflinks 2.71875 0.0 9.16469    
cufflinks 0.337        
cufflinks 0.118        
cufflinks 2.219       High
cufflinks 0.296        
cufflinks 0.037     Low Low
cufflinks 2.249       High
cufflinks 0.043     Low Low
cufflinks 0.99       High
cufflinks 0.233        
cufflinks 0.314        
cufflinks 0.024     Low Low
cufflinks 0.096        
cufflinks 0.046     Low  
cufflinks 0.54        
cufflinks 0.12        
cufflinks 0.021     Low Low
cufflinks 0.682        

0 Strain