Gene : Glyma.12G072400 G. max Wm82.a2.v1
Defline:  (1 of 15) PTHR31992:SF8 - DOF ZINC FINGER PROTEIN DOF1.1-RELATED Genomic Order:  724
Name:  ? Glyma.12G072400 Secondary Identifier:  ? PAC:30549120
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G072400 0.5kb upstream 0.5kb upstream 2957 true Chr12: 5331348-5334304 Glycine max
Glyma.12G072400 0.5kb upstream 0.5kb upstream 500 false Chr12: 5333805-5334304 Glycine max
Glyma.12G072400 0.5kb downstream 0.5kb downstream 2957 true Chr12: 5330848-5333804 Glycine max
Glyma.12G072400 0.5kb downstream 0.5kb downstream 500 false Chr12: 5330848-5331347 Glycine max
Glyma.12G072400 1.0kb upstream 1.0kb upstream 3457 true Chr12: 5331348-5334804 Glycine max
Glyma.12G072400 1.0kb upstream 1.0kb upstream 1000 false Chr12: 5333805-5334804 Glycine max
Glyma.12G072400 1.0kb downstream 1.0kb downstream 3457 true Chr12: 5330348-5333804 Glycine max
Glyma.12G072400 1.0kb downstream 1.0kb downstream 1000 false Chr12: 5330348-5331347 Glycine max
Glyma.12G072400 2.0kb upstream 2.0kb upstream 4457 true Chr12: 5331348-5335804 Glycine max
Glyma.12G072400 2.0kb upstream 2.0kb upstream 2000 false Chr12: 5333805-5335804 Glycine max
Glyma.12G072400 2.0kb downstream 2.0kb downstream 4457 true Chr12: 5329348-5333804 Glycine max
Glyma.12G072400 2.0kb downstream 2.0kb downstream 2000 false Chr12: 5329348-5331347 Glycine max
Glyma.12G072400 5.0kb upstream 5.0kb upstream 7457 true Chr12: 5331348-5338804 Glycine max
Glyma.12G072400 5.0kb upstream 5.0kb upstream 5000 false Chr12: 5333805-5338804 Glycine max
Glyma.12G072400 5.0kb downstream 5.0kb downstream 7457 true Chr12: 5326348-5333804 Glycine max
Glyma.12G072400 5.0kb downstream 5.0kb downstream 5000 false Chr12: 5326348-5331347 Glycine max
Glyma.12G072400 10.0kb upstream 10.0kb upstream 12457 true Chr12: 5331348-5343804 Glycine max
Glyma.12G072400 10.0kb upstream 10.0kb upstream 10000 false Chr12: 5333805-5343804 Glycine max
Glyma.12G072400 10.0kb downstream 10.0kb downstream 12457 true Chr12: 5321348-5333804 Glycine max
Glyma.12G072400 10.0kb downstream 10.0kb downstream 10000 false Chr12: 5321348-5331347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306916 5265 Fabidae View MSA
124067920 5270 Rosid View MSA
123748434 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.37264 0.0 10.3823    
cufflinks 7.78622 0.0 21.5916    
cufflinks 3.85197 0.0 11.5582    
cufflinks 12.5623 0.0 33.7732   High
cufflinks 3.86321 0.0 11.6756    
cufflinks 0.482897 0.0 1.79264   Low
cufflinks 5.87387 0.0 16.7771    
cufflinks 8.96108 0.0 24.5167    
cufflinks 3.71889 0.0 11.2601    
cufflinks 3.818        
cufflinks 3.756        
cufflinks 6.526        
cufflinks 2.85        
cufflinks 1.492       Low
cufflinks 1.402       Low
cufflinks 6.435        
cufflinks 1.603       Low
cufflinks 6.148        
cufflinks 5.485        
cufflinks 7.656     High  
cufflinks 5.082        
cufflinks 6.93        
cufflinks 9.599     High High
cufflinks 3.821        
cufflinks 6.548        
cufflinks 4.345        

0 Strain