Gene : Glyma.12G057600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11649//PTHR11649:SF60 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  576
Name:  ? Glyma.12G057600 Secondary Identifier:  ? PAC:30547416
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G057600 0.5kb upstream 0.5kb upstream 6528 true Chr12: 4185724-4192251 Glycine max
Glyma.12G057600 0.5kb upstream 0.5kb upstream 500 false Chr12: 4191752-4192251 Glycine max
Glyma.12G057600 0.5kb downstream 0.5kb downstream 6528 true Chr12: 4185224-4191751 Glycine max
Glyma.12G057600 0.5kb downstream 0.5kb downstream 500 false Chr12: 4185224-4185723 Glycine max
Glyma.12G057600 1.0kb upstream 1.0kb upstream 7028 true Chr12: 4185724-4192751 Glycine max
Glyma.12G057600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4191752-4192751 Glycine max
Glyma.12G057600 1.0kb downstream 1.0kb downstream 7028 true Chr12: 4184724-4191751 Glycine max
Glyma.12G057600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4184724-4185723 Glycine max
Glyma.12G057600 2.0kb upstream 2.0kb upstream 8028 true Chr12: 4185724-4193751 Glycine max
Glyma.12G057600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4191752-4193751 Glycine max
Glyma.12G057600 2.0kb downstream 2.0kb downstream 8028 true Chr12: 4183724-4191751 Glycine max
Glyma.12G057600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4183724-4185723 Glycine max
Glyma.12G057600 5.0kb upstream 5.0kb upstream 11028 true Chr12: 4185724-4196751 Glycine max
Glyma.12G057600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4191752-4196751 Glycine max
Glyma.12G057600 5.0kb downstream 5.0kb downstream 11028 true Chr12: 4180724-4191751 Glycine max
Glyma.12G057600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4180724-4185723 Glycine max
Glyma.12G057600 10.0kb upstream 10.0kb upstream 16028 true Chr12: 4185724-4201751 Glycine max
Glyma.12G057600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4191752-4201751 Glycine max
Glyma.12G057600 10.0kb downstream 10.0kb downstream 16028 true Chr12: 4175724-4191751 Glycine max
Glyma.12G057600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4175724-4185723 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303971 5265 Fabidae View MSA
124068964 5270 Rosid View MSA
123747725 5271 Pentapetalae View MSA
122788660 5272 Eudicot View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.2198 0.0 51.8502   High
cufflinks 7.8949 0.0 21.2673    
cufflinks 5.87868 0.0 16.0828    
cufflinks 6.13079 0.0 16.7424    
cufflinks 4.81851 0.0 13.4138    
cufflinks 2.3731 0.0 7.19751   Low
cufflinks 8.79144 0.0 23.5907    
cufflinks 7.11121 0.0 19.2414    
cufflinks 4.69953 0.0 13.1152    
cufflinks 2.26        
cufflinks 0.248       Low
cufflinks 3.278        
cufflinks 1.119        
cufflinks 1.283        
cufflinks 1.09        
cufflinks 8.354     High High
cufflinks 0.868        
cufflinks 3.525        
cufflinks 3.888        
cufflinks 9.587     High High
cufflinks 0.393       Low
cufflinks 9.088     High High
cufflinks 8.273     High High
cufflinks 0.374       Low
cufflinks 8.154     High High
cufflinks 0.65        

0 Strain