Gene : Glyma.12G058000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10283:SF76 - DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC Genomic Order:  580
Name:  ? Glyma.12G058000 Secondary Identifier:  ? PAC:30545470
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G058000 0.5kb upstream 0.5kb upstream 4269 true Chr12: 4219305-4223573 Glycine max
Glyma.12G058000 0.5kb upstream 0.5kb upstream 500 false Chr12: 4219305-4219804 Glycine max
Glyma.12G058000 0.5kb downstream 0.5kb downstream 4269 true Chr12: 4219805-4224073 Glycine max
Glyma.12G058000 0.5kb downstream 0.5kb downstream 500 false Chr12: 4223574-4224073 Glycine max
Glyma.12G058000 1.0kb upstream 1.0kb upstream 4769 true Chr12: 4218805-4223573 Glycine max
Glyma.12G058000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4218805-4219804 Glycine max
Glyma.12G058000 1.0kb downstream 1.0kb downstream 4769 true Chr12: 4219805-4224573 Glycine max
Glyma.12G058000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4223574-4224573 Glycine max
Glyma.12G058000 2.0kb upstream 2.0kb upstream 5769 true Chr12: 4217805-4223573 Glycine max
Glyma.12G058000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4217805-4219804 Glycine max
Glyma.12G058000 2.0kb downstream 2.0kb downstream 5769 true Chr12: 4219805-4225573 Glycine max
Glyma.12G058000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4223574-4225573 Glycine max
Glyma.12G058000 5.0kb upstream 5.0kb upstream 8769 true Chr12: 4214805-4223573 Glycine max
Glyma.12G058000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4214805-4219804 Glycine max
Glyma.12G058000 5.0kb downstream 5.0kb downstream 8769 true Chr12: 4219805-4228573 Glycine max
Glyma.12G058000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4223574-4228573 Glycine max
Glyma.12G058000 10.0kb upstream 10.0kb upstream 13769 true Chr12: 4209805-4223573 Glycine max
Glyma.12G058000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4209805-4219804 Glycine max
Glyma.12G058000 10.0kb downstream 10.0kb downstream 13769 true Chr12: 4219805-4233573 Glycine max
Glyma.12G058000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4223574-4233573 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305349 5265 Fabidae View MSA
124069174 5270 Rosid View MSA
123743248 5271 Pentapetalae View MSA
122791234 5272 Eudicot View MSA
122043898 5273 Angiosperm View MSA
121349578 5274 Embryophyte View MSA
123427902 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.8457 0.0 78.1739 High High
cufflinks 14.7383 0.0 39.3676    
cufflinks 5.60034 0.0 15.9709   Low
cufflinks 18.8926 0.0 50.429    
cufflinks 20.2145 0.0 54.082 High  
cufflinks 9.05931 0.0 24.6011    
cufflinks 7.4869 0.0 20.5761   Low
cufflinks 18.5433 0.0 49.4889    
cufflinks 12.9145 0.0 34.5594    
cufflinks 12.577     High  
cufflinks 0.85       Low
cufflinks 5.486        
cufflinks 8.72     High  
cufflinks 11.948     High  
cufflinks 2.57        
cufflinks 13.192     High  
cufflinks 1.779       Low
cufflinks 8.357     High  
cufflinks 8.739     High  
cufflinks 8.569     High  
cufflinks 1.173       Low
cufflinks 10.142     High  
cufflinks 17.889     High High
cufflinks 1.244       Low
cufflinks 11.688     High  
cufflinks 1.806       Low

0 Strain