Gene : Glyma.12G059700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23148 - SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN Genomic Order:  597
Name:  ? Glyma.12G059700 Secondary Identifier:  ? PAC:30548766
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G059700 0.5kb upstream 0.5kb upstream 6793 true Chr12: 4313016-4319808 Glycine max
Glyma.12G059700 0.5kb upstream 0.5kb upstream 500 false Chr12: 4319309-4319808 Glycine max
Glyma.12G059700 0.5kb downstream 0.5kb downstream 6793 true Chr12: 4312516-4319308 Glycine max
Glyma.12G059700 0.5kb downstream 0.5kb downstream 500 false Chr12: 4312516-4313015 Glycine max
Glyma.12G059700 1.0kb upstream 1.0kb upstream 7293 true Chr12: 4313016-4320308 Glycine max
Glyma.12G059700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4319309-4320308 Glycine max
Glyma.12G059700 1.0kb downstream 1.0kb downstream 7293 true Chr12: 4312016-4319308 Glycine max
Glyma.12G059700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4312016-4313015 Glycine max
Glyma.12G059700 2.0kb upstream 2.0kb upstream 8293 true Chr12: 4313016-4321308 Glycine max
Glyma.12G059700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4319309-4321308 Glycine max
Glyma.12G059700 2.0kb downstream 2.0kb downstream 8293 true Chr12: 4311016-4319308 Glycine max
Glyma.12G059700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4311016-4313015 Glycine max
Glyma.12G059700 5.0kb upstream 5.0kb upstream 11293 true Chr12: 4313016-4324308 Glycine max
Glyma.12G059700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4319309-4324308 Glycine max
Glyma.12G059700 5.0kb downstream 5.0kb downstream 11293 true Chr12: 4308016-4319308 Glycine max
Glyma.12G059700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4308016-4313015 Glycine max
Glyma.12G059700 10.0kb upstream 10.0kb upstream 16293 true Chr12: 4313016-4329308 Glycine max
Glyma.12G059700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4319309-4329308 Glycine max
Glyma.12G059700 10.0kb downstream 10.0kb downstream 16293 true Chr12: 4303016-4319308 Glycine max
Glyma.12G059700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4303016-4313015 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299188 5265 Fabidae View MSA
124062879 5270 Rosid View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8086 0.0 37.4695    
cufflinks 12.8876 0.0 34.829    
cufflinks 13.2814 0.0 35.9908    
cufflinks 15.959 0.0 43.7919   High
cufflinks 12.9829 0.0 35.1078    
cufflinks 8.62173 0.0 23.0107   Low
cufflinks 13.5428 0.0 36.6634    
cufflinks 11.7728 0.0 31.6985    
cufflinks 11.0419 0.0 29.6353    
cufflinks 6.884       Low
cufflinks 9.873     High  
cufflinks 10.469     High  
cufflinks 9.892     High  
cufflinks 10.584     High  
cufflinks 14.087     High High
cufflinks 12.784     High  
cufflinks 4.546       Low
cufflinks 10.211     High  
cufflinks 12.309     High  
cufflinks 12.473     High  
cufflinks 9.891     High  
cufflinks 12.188     High  
cufflinks 11.397     High  
cufflinks 7.944     High  
cufflinks 13.229     High  
cufflinks 8.459     High  

0 Strain