Gene : Glyma.12G060700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR22763//PTHR22763:SF42 - RING ZINC FINGER PROTEIN Genomic Order:  607
Name:  ? Glyma.12G060700 Secondary Identifier:  ? PAC:30546325
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G060700 0.5kb upstream 0.5kb upstream 2214 true Chr12: 4406289-4408502 Glycine max
Glyma.12G060700 0.5kb upstream 0.5kb upstream 500 false Chr12: 4406289-4406788 Glycine max
Glyma.12G060700 0.5kb downstream 0.5kb downstream 2214 true Chr12: 4406789-4409002 Glycine max
Glyma.12G060700 0.5kb downstream 0.5kb downstream 500 false Chr12: 4408503-4409002 Glycine max
Glyma.12G060700 1.0kb upstream 1.0kb upstream 2714 true Chr12: 4405789-4408502 Glycine max
Glyma.12G060700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4405789-4406788 Glycine max
Glyma.12G060700 1.0kb downstream 1.0kb downstream 2714 true Chr12: 4406789-4409502 Glycine max
Glyma.12G060700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4408503-4409502 Glycine max
Glyma.12G060700 2.0kb upstream 2.0kb upstream 3714 true Chr12: 4404789-4408502 Glycine max
Glyma.12G060700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4404789-4406788 Glycine max
Glyma.12G060700 2.0kb downstream 2.0kb downstream 3714 true Chr12: 4406789-4410502 Glycine max
Glyma.12G060700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4408503-4410502 Glycine max
Glyma.12G060700 5.0kb upstream 5.0kb upstream 6714 true Chr12: 4401789-4408502 Glycine max
Glyma.12G060700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4401789-4406788 Glycine max
Glyma.12G060700 5.0kb downstream 5.0kb downstream 6714 true Chr12: 4406789-4413502 Glycine max
Glyma.12G060700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4408503-4413502 Glycine max
Glyma.12G060700 10.0kb upstream 10.0kb upstream 11714 true Chr12: 4396789-4408502 Glycine max
Glyma.12G060700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4396789-4406788 Glycine max
Glyma.12G060700 10.0kb downstream 10.0kb downstream 11714 true Chr12: 4406789-4418502 Glycine max
Glyma.12G060700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4408503-4418502 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312857 5265 Fabidae View MSA
124073026 5270 Rosid View MSA
123745848 5271 Pentapetalae View MSA
122795555 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2082 0.0 48.5825   High
cufflinks 1.20091 0.0 4.21883    
cufflinks 1.83248 0.0 6.21712    
cufflinks 1.8612 0.0 6.26478    
cufflinks 3.17686 0.0 9.79124    
cufflinks 1.89264 0.0 6.30584    
cufflinks 1.19681 0.0 4.18737    
cufflinks 2.32793 0.0 7.60039    
cufflinks 1.76384 0.0 5.94044    
cufflinks 9.978     High  
cufflinks 15.071     High  
cufflinks 9.467     High  
cufflinks 3.516        
cufflinks 1.433       Low
cufflinks 29.545     High High
cufflinks 9.306     High  
cufflinks 20.648     High High
cufflinks 10.491     High  
cufflinks 1.312       Low
cufflinks 4.28        
cufflinks 7.316     High  
cufflinks 5.056        
cufflinks 2.851        
cufflinks 14.936     High  
cufflinks 1.191       Low
cufflinks 10.665     High  

0 Strain