Gene : Glyma.12G061000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR33102:SF3 - DVL13-RELATED Genomic Order:  610
Name:  ? Glyma.12G061000 Secondary Identifier:  ? PAC:30546879
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G061000 0.5kb upstream 0.5kb upstream 1359 true Chr12: 4431157-4432515 Glycine max
Glyma.12G061000 0.5kb upstream 0.5kb upstream 500 false Chr12: 4432016-4432515 Glycine max
Glyma.12G061000 0.5kb downstream 0.5kb downstream 1359 true Chr12: 4430657-4432015 Glycine max
Glyma.12G061000 0.5kb downstream 0.5kb downstream 500 false Chr12: 4430657-4431156 Glycine max
Glyma.12G061000 1.0kb upstream 1.0kb upstream 1859 true Chr12: 4431157-4433015 Glycine max
Glyma.12G061000 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4432016-4433015 Glycine max
Glyma.12G061000 1.0kb downstream 1.0kb downstream 1859 true Chr12: 4430157-4432015 Glycine max
Glyma.12G061000 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4430157-4431156 Glycine max
Glyma.12G061000 2.0kb upstream 2.0kb upstream 2859 true Chr12: 4431157-4434015 Glycine max
Glyma.12G061000 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4432016-4434015 Glycine max
Glyma.12G061000 2.0kb downstream 2.0kb downstream 2859 true Chr12: 4429157-4432015 Glycine max
Glyma.12G061000 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4429157-4431156 Glycine max
Glyma.12G061000 5.0kb upstream 5.0kb upstream 5859 true Chr12: 4431157-4437015 Glycine max
Glyma.12G061000 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4432016-4437015 Glycine max
Glyma.12G061000 5.0kb downstream 5.0kb downstream 5859 true Chr12: 4426157-4432015 Glycine max
Glyma.12G061000 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4426157-4431156 Glycine max
Glyma.12G061000 10.0kb upstream 10.0kb upstream 10859 true Chr12: 4431157-4442015 Glycine max
Glyma.12G061000 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4432016-4442015 Glycine max
Glyma.12G061000 10.0kb downstream 10.0kb downstream 10859 true Chr12: 4421157-4432015 Glycine max
Glyma.12G061000 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4421157-4431156 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303908 5265 Fabidae View MSA
124068488 5270 Rosid View MSA
123751653 5271 Pentapetalae View MSA
122795798 5272 Eudicot View MSA
122048565 5273 Angiosperm View MSA
121346075 5274 Embryophyte View MSA
123380321 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0413801 0.0 0.18766 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.572773 0.0 2.22457    
cufflinks 7.18028 0.0 23.5434   High
cufflinks 2.50585 0.0 9.09594    
cufflinks 0.411257 0.0 1.61846    
cufflinks 0.0400587 0.0 0.181304 Low Low
cufflinks 5.85197 0.0 19.6391   High
cufflinks 0.07     Low  
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.061       High
cufflinks 8.537     High High
cufflinks 0.043     Low  
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.026     Low  
cufflinks 0.066     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.053     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.017     Low  
cufflinks 0.078        

0 Strain