Gene : Glyma.12G061600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  616
Name:  ? Glyma.12G061600 Secondary Identifier:  ? PAC:30549067
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CALVIN-PWY Glycine max pathologic  
Gmax PHOTOALL-PWY Glycine max pathologic  
Gmax PWY-5723 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G061600 0.5kb upstream 0.5kb upstream 929 true Chr12: 4499104-4500032 Glycine max
Glyma.12G061600 0.5kb upstream 0.5kb upstream 500 false Chr12: 4499533-4500032 Glycine max
Glyma.12G061600 0.5kb downstream 0.5kb downstream 929 true Chr12: 4498604-4499532 Glycine max
Glyma.12G061600 0.5kb downstream 0.5kb downstream 500 false Chr12: 4498604-4499103 Glycine max
Glyma.12G061600 1.0kb upstream 1.0kb upstream 1429 true Chr12: 4499104-4500532 Glycine max
Glyma.12G061600 1.0kb upstream 1.0kb upstream 1000 false Chr12: 4499533-4500532 Glycine max
Glyma.12G061600 1.0kb downstream 1.0kb downstream 1429 true Chr12: 4498104-4499532 Glycine max
Glyma.12G061600 1.0kb downstream 1.0kb downstream 1000 false Chr12: 4498104-4499103 Glycine max
Glyma.12G061600 2.0kb upstream 2.0kb upstream 2429 true Chr12: 4499104-4501532 Glycine max
Glyma.12G061600 2.0kb upstream 2.0kb upstream 2000 false Chr12: 4499533-4501532 Glycine max
Glyma.12G061600 2.0kb downstream 2.0kb downstream 2429 true Chr12: 4497104-4499532 Glycine max
Glyma.12G061600 2.0kb downstream 2.0kb downstream 2000 false Chr12: 4497104-4499103 Glycine max
Glyma.12G061600 5.0kb upstream 5.0kb upstream 5429 true Chr12: 4499104-4504532 Glycine max
Glyma.12G061600 5.0kb upstream 5.0kb upstream 5000 false Chr12: 4499533-4504532 Glycine max
Glyma.12G061600 5.0kb downstream 5.0kb downstream 5429 true Chr12: 4494104-4499532 Glycine max
Glyma.12G061600 5.0kb downstream 5.0kb downstream 5000 false Chr12: 4494104-4499103 Glycine max
Glyma.12G061600 10.0kb upstream 10.0kb upstream 10429 true Chr12: 4499104-4509532 Glycine max
Glyma.12G061600 10.0kb upstream 10.0kb upstream 10000 false Chr12: 4499533-4509532 Glycine max
Glyma.12G061600 10.0kb downstream 10.0kb downstream 10429 true Chr12: 4489104-4499532 Glycine max
Glyma.12G061600 10.0kb downstream 10.0kb downstream 10000 false Chr12: 4489104-4499103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298228 5265 Fabidae View MSA
124074092 5270 Rosid View MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0406298 0.0 0.195349 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0668309 0.0 0.306099 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.901        
cufflinks 0.046     Low Low
cufflinks 6.758       High
cufflinks 0.04     Low Low
cufflinks 0.028     Low Low
cufflinks 0.087        
cufflinks 1.273        
cufflinks 0.108        
cufflinks 3.054        
cufflinks 0.615        
cufflinks 1.731        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.113        
cufflinks 3.896       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.819        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain